Dryobates pubescens (Downy woodpecker): 104305715
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Entry
104305715 CDS
T08526
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03013
Nucleocytoplasmic transport
dpub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104305715 (PNN)
03015 mRNA surveillance pathway
104305715 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104305715 (PNN)
03041 Spliceosome [BR:
dpub03041
]
104305715 (PNN)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104305715 (PNN)
Spliceosome [BR:
dpub03041
]
Complex C
Other components
EJC/TREX
104305715 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
104305715
NCBI-ProteinID:
XP_009904910
UniProt:
A0A093GRS8
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLSITGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGATSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLMEESQKKMNALFESRRNEFAEQINKMEARPRRQSVKEKEQQEVQN
EEKKEEQNKEQEEGKVAQQVEELETGNQHNDVEMEELGEEKGKSGSGHSDAEKEQEEDEQ
KHEIEIKVEETAEVRENDMQQDGQHEEITVLKEESENIQPMDNEQDMAEMNEADSVEPVE
NENGKVEPETECDAQPEKVCNAPSPEKEKGIKQEIEAEPEEKQEIAPEAQTEPVTEALSQ
PQSVPLSQSPQLSQSTQDTEPQADKEENAVVSVKVIEAQTEQSQAPSVEIKNKTRSRSRV
RAGNKAGKSHSRSSSSSSSSSTSSSTTSGSSSSTGSSTTRSSSTSSSTTSGSTSRDSSSS
SSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSSRS
DRKRSISENSRSGKRTSRSERDRKSDRKDKRR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgtgcgctgcaagagcagctggagaaggccaaggagagcctcaag
cacgtggacgagaacatccgcaagctcacgggacgggaccccaatgatgtgaggccccct
caaaacagattgttatccatcacaggccctggtggaggtagagggcgtgggagcttacta
ctaaggcgtggattctcggatagtggaggaggacccccagccaagcagagagatcttgaa
ggggcaaccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgacgatattaaaaagccagcgttgccatcttctgttgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgttgatgggcactcttcaaaaatttaaacaggagtcc
acagttgctactgagaggcaaaagagacgacaagaaattgaacaaaaacttgaagtgcag
gcagaggaggaaagaaagcaagttgaaaacgaaaggcgagagctgtttgaagaaagacgt
gctaaacagacagagctgcggttgctggagcagaaggttgagcttgctcagctgcaagaa
gaatggaatgagcacaacgctaaaataattaaatacataagaactaagacaaaaccccac
ttgttctacatacccggcagaatgtgtcctgctacgcagaagctgatggaagagtcgcag
aaaaagatgaatgcactcttcgaaagcaggcgaaatgaatttgcagagcagattaacaaa
atggaggccaggcccagaagacaatctgtgaaggaaaaagaacagcaggaggtgcagaat
gaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcagcaggtg
gaagagttggagacaggtaatcagcacaatgatgtagaaatggaggagttaggggaggaa
aagggaaaatcaggttcagggcatagcgatgcagagaaagaacaggaagaggatgaacag
aaacatgaaattgagattaaagtagaagagactgctgaggtgagggagaatgacatgcaa
caggatggtcagcatgaagagatcacagttctaaaagaggaaagtgaaaacattcagcca
atggataatgagcaggatatggctgaaatgaatgaggcagatagtgtagaacctgtagaa
aatgaaaatggcaaagtggaaccagaaacagagtgtgatgctcagccagaaaaagtgtgc
aatgctccttctcctgagaaggagaaaggtatcaaacaagaaattgaagctgaacctgaa
gagaaacaggagatagcaccggaagctcagacagaacctgtaactgaggctctgtctcag
ccacagtctgtgccattgtcacagtcacctcagttgtctcagtccactcaggatacagag
ccccaggcagacaaggaggaaaatgctgtggtgtctgtaaaggtgattgaggcacagaca
gagcagagtcaggcaccaagtgtagaaattaaaaataaaactaggagtagaagcagggtt
agagcagggaacaaagctggtaaaagtcacagccgtagtagcagcagcagtagcagcagt
agtacttcaagcagtactactagtggaagtagttccagcactggcagcagtaccacgcgg
agtagttccaccagcagcagcactacaagtggcagtactagcagggacagtagcagtagt
agctctagcagtagtgaaagtagaagtcgaagccgaggaagagggcacaaccgagacaga
aagcgcagaaggagcacggacaggaagcgaagggatgcttcaggagtagataggagtcac
aagtcctcaaaaggtggcagtagagataccaaaagctcaaaggataaaagttcaagatct
gacagaaagaggtctatatcagaaaatagtcggtcaggcaagagaacttcacggagtgaa
agagaccgtaaatcagacaggaaagacaaaaggcgttaa
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integrated database retrieval system
