Dryobates pubescens (Downy woodpecker): 104305821
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Entry
104305821 CDS
T08526
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub00310
Lysine degradation
dpub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104305821 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpub03000
]
104305821 (PRDM2)
03036 Chromosome and associated proteins [BR:
dpub03036
]
104305821 (PRDM2)
Enzymes [BR:
dpub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
104305821 (PRDM2)
Transcription factors [BR:
dpub03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104305821 (PRDM2)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104305821 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-H2C2_2
zf-C2HE
zf-C2H2_ZNF462_1st
zf-C2H2_11
PyrI_C
zf-MYST
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
104305821
NCBI-ProteinID:
XP_009905032
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MRDAKEGHKEEDETPSVSAVLSLEQTAVIQEMVNQDVLPKLMIPSPTSEPQIVTEDKQGE
IINCASDDLDDDEEEDDEEEEDEEEVEDPNMPKENAEMPLICEEKLESVEEQKSLSEESP
ESSPKKKLVVKIPKARGESNGDVQETFMFPCQHCERKFTTKQGLERHMHIHISTINHAFK
CRYCGKAFGTQINRRRHERRHESGLKRKPFLTLTSSQHLDNVGDNQIIVDDGLKDDLNVS
SLVQDSVVLDSEKVSQELSNSAFAEENKEPKELHPCKYCKKVFGTHTNMRRHQRRVHERH
LIPKGVRRKGFFTEEPPLQIEQAPPVQSVYIASTEIEEEGEVDDVYIMDISSNISENLNY
YIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVEIAPNLKVTPTHVNEPPKEPS
SSGSNESKKRRTASPPLVPKIKTEIDPEPITPTSSLNLPLSISTESLPFNKEKGVYLSSK
LKQLLQTQDSKKITPSSEIPKLGPSVTSSPILPPVSGRFKRRTSSPPSSPQHSPVLRDFK
SGEGKTVWNDNIRSSKMPKLESHSNSPAWSLTGREEKEPPSPHCFEDYKISKDWTAAPAF
GSVCNQQPLDLSSGVKQRSDVKNKNQVPWESVLDLSVHKKPGSDADIRDYKENSIQPTCS
GVKKKKPTTCMLQKVLLNEYNGTDAATDSTLGVNASASPSKALEPQAEPDVDPSLSASSS
VDTQPLSSSASPVPQASAVPPVCQLPPLLTPTNPPSPPPCPPVLTVATSPPPLLPPMPLP
TPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSPVPSVEPLISAASPGPPTLSS
SSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLENTLPMIKQEEAETEQQKARED
PHTSSESGGVVQETFNKSFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFRDKT
DLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKECTHHEFESGTLRPQNFT
DPSKANAEHMQSLPEDSLEPSKEEEDEDLNDSSEELYTTIKIMASGVKSKDPDVRMGLNQ
HYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKHIL
ACASASDKKRYTPKKNPVPLKQTVQPKNGMVVLAGPGKNAFRRMGQPKRLNFNVEISKMS
SNKLKISALKKKNQLVQKAILQKKKSAQQKAELKNHPSESDSHICPYCNREFTYIGSLNK
HASYSCPKKPISPSSKKNSKKSANSSPASSEKGSNQRRRTADAEIKMQSMQPHLGKTRAR
TSGPAQIQLPSASFRSKQNVKFGPSMRSKKPNSSSLRNSSPVRVSKMSHVEGKKAKMVAK
NSSAGISSKASRKLHVRIQRNNKAVLPSKSAVASKKKADRFAVKSRERIGGPITRSLQQA
ANAEAAENKRDESSAKQELKDFRNLL
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgagggatgctaaagagggtcataaagaggaagatgaaacaccttctgtttctgctgta
ctgtccctggagcaaacagctgtgattcaggagatggtaaatcaggatgtacttccaaag
ctgatgatccccagtcctaccagtgaaccacaaatagtgactgaagacaagcaaggagaa
ataataaactgtgcatcagatgatttagatgatgatgaagaggaggatgatgaagaggaa
gaagacgaagaggaagtagaagatcccaatatgcctaaagaaaacgctgaaatgcctttg
atatgtgaagaaaagttagagtctgtggaggagcagaagagtctgtcagaagaatctcca
gaaagctctccaaagaaaaagcttgttgtgaaaattccaaaagctagaggcgaatccaac
ggtgatgttcaggaaacattcatgtttccctgtcagcactgtgagaggaagttcacaacc
aagcaaggcctggaacgccacatgcacatccacatatctactatcaaccacgcgttcaag
tgtcggtactgcgggaaagccttcggcactcaaatcaacaggcgaaggcacgagcgacgc
cacgagtcagggctgaaaaggaaacccttcctaacactaacatcatcacaacacttggat
aatgttggtgataaccaaataattgtggatgatggtcttaaagatgacctgaacgtttca
agtcttgtgcaagactctgttgtcttggattcggagaaggtttcccaggagttgtccaac
tctgcttttgctgaggagaataaggagcccaaagaattgcatccctgcaaatactgcaaa
aaggtttttggaactcacaccaacatgaggaggcaccagcgcagggttcatgaacgccat
cttattcccaaaggtgtcaggagaaaaggattcttcaccgaagagccaccgcttcagata
gagcaggccccgccggtccagagcgtgtacatagcaagcacagagatagaagaggaaggg
gaagtagatgatgtctatattatggatatttccagcaatatctctgaaaatttaaattat
tacattgatggtaaaattcagtccaacagcagcactagcaactgtgatgtgattcagatg
gagtccaactctgcagacttgtatgggctaaattgtataatcagcccagtcacggtggaa
attgccccaaatttaaaggtcacgccaacacacgtgaatgaacctcctaaggaaccctcc
agcagtgggagcaatgaatccaaaaagaggagaactgccagcccacctcttgtaccaaaa
ataaaaactgaaatagacccagaacctataactcctactagttctttaaatcttcctctt
agcatttcaacagaaagcttgcctttcaacaaagagaaaggggtttatttgtcatccaaa
ttaaaacagcttcttcagacgcaggacagtaagaagataactccatcaagtgaaatccct
aaactagggccttctgttacatcatcacccattttgcctccagtatcaggtagatttaaa
agaaggaccagctctcctcccagctctccacagcacagcccagtacttcgagacttcaaa
tcaggtgagggaaaaactgtctggaatgataatattcggagttcaaaaatgccaaagtta
gaaagccacagcaactcacctgcttggagcttgactggacgggaggagaaagagcctcca
agccctcattgctttgaagactacaaaatctccaaagattggacagcagctccagctttt
ggcagtgtgtgcaaccagcagccgctggatttatccagtggtgtgaaacaaaggtctgac
gtcaaaaacaagaatcaggttccctgggaatctgtcttagatctaagtgtgcataagaag
cctggcagcgatgctgacattagggactataaagaaaattccatacagccaacctgtagt
ggtgttaaaaagaagaaaccaaccacctgcatgttacagaaggtcctgctcaatgagtat
aacgggacagatgcagccacggacagcacgctcggtgtgaacgcgagcgcgagtccgagc
aaagccctggagcctcaggcagaacctgatgtggatcccagtttgtcagcatcatcgtct
gttgacactcagcccctcagttcctctgcttcccctgtgccacaggcatctgctgtacct
cccgtgtgccagctgcctcctttgttaacaccaaccaatcctccttcccctccgccctgc
ccgcctgtgctaacagttgctacatcgccgcctcccctacttccaccgatgcccttaccg
actccagatgtctctgccagcgccactaacacttcgtcctgtccatcaccactttctaac
actaccacccagtcccctctaccagttctttcacctacagtttctccttctccgtcccct
gttccttctgttgaacctcttatttctgccgcttcacctggtccgcccaccctctcttcc
tcatcttcctcctcctcctcttcttcctctttctcctcctcttcatcttcatcatcccca
tctccaccacccctttctgtggtttcttctgtcgtttcctctgctgataatcttgaaaat
actctcccgatgatcaaacaggaggaagctgaaactgagcagcagaaagcgcgagaagat
cctcacacttcaagcgaatcgggaggagtagtgcaggaaacgttcaacaaaagctttgtg
tgcaatgtctgcgaatcacctttcctttccattaaagacctaaccaagcatttatccatt
catgctgaagaatggcccttcaaatgtgaattctgtgtacagctttttagggataaaaca
gacttgtcggaacaccgctttctgcttcacggagtaggaaatatctttgtttgctcggtc
tgtaaaaaggagtttgcttttttgtgcaatttgcagcagcatcagcgagatctccatcca
gacaaagagtgcacacatcacgagtttgaaagtgggactttgagaccccagaattttact
gaccccagtaaggccaacgcggagcacatgcagagcctgccggaggattctttggaacct
tctaaagaggaggaggatgaagatctaaatgattcctctgaggagctttatactactata
aaaattatggcgtctggagtaaaatctaaagatccagatgttcgtatgggcctcaaccaa
cactacccgagctttaaaccacctccatttcagtatcaccatcgtaatcctatgggtatt
ggggttactgccacaaacttcactacccacaatattccccagacttttaccactgccatt
cgatgcacaaaatgtgggaagagcgtggataacatgcctgagttacacaaacacatcctg
gcctgtgcttctgccagtgataaaaagagatacacccctaaaaaaaatccagtaccgctg
aaacagacagtgcagcctaagaatggcatggtggttctagctggccctggaaagaacgcc
ttcagacgaatgggtcagcctaaaagactgaattttaacgttgagattagcaaaatgtcc
tcaaataaactaaaaataagtgcattgaaaaagaaaaaccagctcgtccagaaagctatc
ttgcaaaaaaagaaatctgcccagcagaaggcagagctgaaaaatcatccatccgagtca
gactctcacatctgcccctactgtaacagagagtttacttacattgggagcttgaacaag
cacgcctcgtacagctgtcccaaaaaacccatctctccctcctctaaaaagaactccaaa
aaaagtgcaaactcttcccctgcaagcagcgagaaaggcagcaaccagcgcaggcgaacg
gcggatgcagaaatcaaaatgcagagcatgcagcctcacttgggcaagaccagggcacga
acctcaggacctgcacaaatccagctcccctctgcgtccttcagatccaaacagaacgtt
aaatttgggccttccatgcgatccaaaaagccaaactcttcgtccctgaggaactctagt
cctgtaagagtgtccaaaatgtcccacgttgaggggaaaaaggctaagatggtggctaag
aacagttctgctggcatctccagcaaagcctcccggaaactgcacgtcaggatacaaagg
aataataaagctgttttgccgagcaagtctgctgtggcaagtaagaaaaaggcagacagg
ttcgctgtgaagtccagagagaggattgggggacctatcacacggagcctccagcaggca
gcaaacgcagaggcagcagaaaacaaaagagatgaaagcagtgcaaagcaagaactaaaa
gatttcaggaatctgctgtaa
DBGET
integrated database retrieval system
