KEGG   Dryobates pubescens (Downy woodpecker): 104305835
Entry
104305835         CDS       T08526                                 
Symbol
PLOD1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub00310  Lysine degradation
dpub01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    104305835 (PLOD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dpub04147]
    104305835 (PLOD1)
Enzymes [BR:dpub01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     104305835 (PLOD1)
Exosome [BR:dpub04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104305835 (PLOD1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 104305835
NCBI-ProteinID: XP_009905044
LinkDB
Position
Unknown
AA seq 730 aa
MVPQAVLLPWAVLALLGAEGGCASEQEENLLVLTVATKQTEGFQRFKRSAQFFNYKIQVL
GLDEEWQGGDDQKPAGGGQKVRLLKSALKQYADKEDLIILFVESYDVLFASGPTELLKKF
KQAKSKVVFSAENYIYPDRKLEAKYPQVRDGKRFLGSGGFIGYAPNLKKLVEEWKGQDDD
SDQLFYTNIFLDPEKRESINISLDQRSRIFQNLNGALDEVVLKFENSRVRARNLLYDTLP
VVIHGNGPTKLQLNYLGNYIPQIWTFETGCTVCDEGLRSLTGFKDEALPMILIGVFIEQP
TPFLSQFFLRLRNLHYPKQRIQLFIHNSEEHHLMDVDSFVEEHGKEYLAVKVVGPDDEME
NAEARNLGMDLCRKDPDCEYYFSLDAEIVLKNTETLRLLIEQNKLVIAPLVSRHEKLWSN
FWGALSPDGYYARSEDYVDIVQRRRVGLWNVPYISSVYMVKAKVLRAELDQADLFHSGKL
DADMAFCHNVRNQGVFMYLTNRYQFGHILSLENYQTTHLHNDLWQIFSNPEDWREKYIHE
NYTAALKGKLVEMPCPDVYWFPIFTDTACDELVEEMEHYGQWSTGDNTDSRIQGGYENVP
TIDIHMNQIGFEREWYKFLLDYIAPITEKLYPGYYTKTQFELAFVVRYKPDEQPSLMPHH
DASTFTINIALNRVGIDYEGGGCRFLRYNCSIRAPRKGWTLMHPGRLTHYHEGLPTTKGT
RYIAVSFIDP
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggtgcctcaggcggtgctgctgccctgggcggtgctggcgttgctcggagcggagggc
ggctgtgcctcagagcaagaagaaaacctgctggtccttactgttgccaccaagcagact
gaggggttccagcgcttcaaaagatcagcccagttcttcaactacaaaatccaggtgctg
gggctggatgaggaatggcagggtggagatgaccagaagccagcaggaggtgggcagaag
gtccgtctcttgaagtctgctttgaagcagtatgcggataaggaagacttaatcatcctt
tttgtagaaagctatgatgtcctctttgcttcgggccccacagaactgctgaagaagttc
aaacaagccaagagcaaggtggtcttctcagcagagaactacatctatcctgacaggaag
ttggaagccaagtaccctcaggtgcgagatggaaagcgcttcctgggttctggaggcttc
ataggttatgctccaaacctgaagaagcttgtggaagagtggaaaggacaggatgatgat
agtgaccagctcttctataccaatatcttcttggatccagaaaaaagagaaagtatcaac
atcagtctagaccaaagaagccgaatcttccaaaacctaaatggagcattagatgaggta
gttctgaagtttgaaaactcaagagtgagagcaagaaacttattatatgacactttgcct
gtggtgattcatggcaatggacccacgaagctgcagctgaactacctgggaaactacatc
cctcagatatggacatttgagactggctgcactgtgtgtgatgaaggtctgcgaagcctc
acagggtttaaggatgaggcattgcccatgattctgattggtgtgttcatcgagcagccc
accccattcctctcccagtttttcttgcggcttcgtaaccttcattacccaaaacaacga
atccagctcttcattcacaacagtgaagaacatcacttgatggatgtggactcttttgtt
gaagagcatggcaaagaatatcttgctgttaaagtggttggaccagatgatgagatggag
aatgctgaagcacgtaacttggggatggatttatgcagaaaggatcctgactgtgagtat
tactttagcctggatgctgagatagttctgaagaacacagagactctaaggctcctcatt
gaacagaacaagctggtgattgccccactggtaagccgtcatgagaagctgtggtcaaac
ttctggggagcactgagccctgacggatactacgcccgctcagaagattacgtggatatt
gttcaaaggcggagggttgggctttggaacgttccctacatcagcagcgtttacatggtt
aaagccaaggttctgcgagcagagcttgaccaggcagacctgttccacagtggcaagctg
gatgctgacatggctttctgccacaacgttcgcaatcagggagtctttatgtaccttaca
aacaggtaccagtttggacacatactgtccctggagaactatcagacaactcatctccac
aatgacctctggcaaatattcagcaaccctgaggactggagagaaaagtacatccatgaa
aactacacagcagctctgaaagggaaattggtagaaatgccttgcccagatgtttactgg
ttccccatattcactgacactgcctgtgatgagctggtggaagaaatggagcattatggc
cagtggtccacaggtgacaacacggacagcagaatacaaggaggatatgagaatgtccca
actattgacatacacatgaatcaaattggttttgaaagggagtggtataagtttcttctg
gactacattgcacccatcacagagaaactgtatccaggatactataccaagactcagttt
gagttagcctttgtagttcgctacaaacccgatgagcagccctctttaatgccccatcac
gatgcttccaccttcaccattaacattgctttgaaccgagttggaatagactatgaggga
ggaggctgccggttcctgcgctacaattgctccattcgagctccacggaaagggtggacc
cttatgcacccaggacgcctgacccactatcatgaaggtcttccaaccaccaaaggaacc
cgttatattgcagtgtcctttattgacccctag

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