Dryobates pubescens (Downy woodpecker): 104305923
Help
Entry
104305923 CDS
T08526
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dpub04515
]
104305923 (CLSTN1)
Cell adhesion molecules [BR:
dpub04515
]
Cadherins
Cadherin related
104305923 (CLSTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
Toxin_R_bind_N
V_ATPase_I
SID-1_RNA_chan
PFF1_TM
Cadherin_C_2
Neur_chan_memb
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
104305923
NCBI-ProteinID:
XP_009905143
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MHVEPQREESYAKRNRISKCQEELVVSSRILVLWTMNFNKHKPWIETTYHGIVTENDNTV
LLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSK
EKLDCELQKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATA
IEGKRYDNILKVEAVDADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQY
KLTVTAYDCGKKRAAEDVLVKISVKPTCKPGWQGWSKRIEYEPGTGSLALFPGMRLETCD
EPITSVEATVELETNHIGKGCDRDTYSEKSIHRLCGAASGTVELLPPPSSAANWTIGLPT
DNGHDSDQVFEFNGTQAVKIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDM
NRHHYTLYVHNCRLVFLFRQDPSEGKTYKPAEFHWKLNEVCDKEWHHYVLNVEFPAVTLY
VDGVSYDPFPVTEDYPLHPSKIETQLVVGACWQDYTGNENDNETVPETSAGGELHMAQFF
RGNLAGLMIRSGKLENKKVIDCLYTCKEGLDLQMADGTGKGVKIHMNPSQSTVSIEGDDI
DRVDKAMQHISYLNSRQFPTPGIRRLKITTDVKCFNEDACVSIPSVEGYVMVLQPEEPKI
SLSGINHFARSASEFESSEGVALFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMH
NLDTCEVTVLGEELNQEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLI
HYRNWHTVSLFDRKFKLVCSELNGRYVSNEFKVEVNVIHTANPVEHANHIAAQPQFVHPV
HHTFVDLSGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDT
GKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEESEEGEEDDITSAESESSEEEE
GEQEEDQQNVNRQQQLEWDDSTLSY
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtagaacctcagcgtgaagagagctacgccaagagaaacaggatatccaagtgt
caagaggaattggttgtttcatcacgaatactggttctgtggactatgaactttaacaaa
cataagccatggattgagacaacctatcatggtatagttacagagaatgacaacacagtg
ctcttggacccccctttaatagccctggacaaagacgcacctctgcgatttgcagagagt
tttgaggtgacagtcaccaaagaaggtgagatttgtggatttaaaattcatgggcaaaat
gttccctttgaagcagtggtagtggataaatccactggtgagggaataatacgctctaaa
gaaaagcttgactgtgagctccagaaggactacaccttcaccatccaggcttatgattgt
ggaaagggaccagatggagccaatgcaaaaaaatcccacaaggcaacagtccatatccag
gtgaatgatgtcaatgagtacgctcctgtgttcaaagagaagtcgtacaaagcaactgct
attgaagggaagaggtatgacaacatcctcaaagtggaagcagtggatgcagattgttca
ccacagttcagccagatctgcagttatgaaattgtaactccggatgtaccttttgctatt
gacaaagatggttacataaaaaacacagaaaagttaaactatggcaaagaacatcagtac
aaactgacagtaacagcctatgactgtgggaagaagagagctgctgaggatgtgctggtt
aaaattagcgttaagcctacatgcaagcctggctggcaaggttggagcaaaagaatagaa
tatgagcctggtactggttccttagctctcttccctggcatgcgtttggagacgtgtgat
gagcccataacctctgttgaagcaacagttgaactagaaaccaatcacattgggaagggc
tgtgacagagacacctactcagagaaatccattcacagactctgtggtgctgcttctggc
acagtcgagctgcttccccctccaagtagtgctgctaactggacaataggactgcctact
gataatggtcatgacagtgaccaagtgtttgaatttaatggtacacaagctgtgaagatt
ccagatggtgttgtcacagtcaatctaaaagagcccttcatgatttcagtgtggatgagg
cacgggcctggaaccaaagagaaagagacaattctgtgcaattcagacaagacagatatg
aaccggcaccactacacgctctacgtgcacaactgccgccttgttttcctcttccgccaa
gatccttcagagggaaaaacttacaaacctgctgagtttcactggaaactcaatgaagtg
tgtgacaaagagtggcatcattacgtcctcaatgtcgaattccctgcagtgacactctat
gtagatggtgtttcctatgatcctttcccagtgactgaagattacccgcttcatccttca
aagatagaaacacagctagtagttggagcatgctggcaagactatacaggaaatgaaaat
gacaatgaaactgtgcctgagacctctgcaggtggtgaactccacatggctcagttcttc
cgaggcaatctggcaggtttgatgattcgttctggcaaactggagaacaagaaggtgatt
gattgcctgtacacttgtaaagagggcctggatctgcagatggctgatggcactggcaag
ggtgtgaagatccacatgaatccaagtcagtcaacagtgagcatagagggggatgacatt
gacagagttgacaaggccatgcagcacatttcctacctgaattctcgccagttcccaaca
cctggcattcggaggcttaaaatcaccactgatgtcaaatgtttcaatgaagatgcctgt
gtctccatcccttctgtggagggatatgtcatggtgctgcaaccagaggagccaaaaatc
agcctcagtggcatcaaccattttgctcgttctgcttccgagtttgagagctctgaggga
gttgccctcttccctgagctgcgcatcataagcaccattacacgggaggtggagcccgag
ggggatggagatgaagatcctacagtgcaagagtctttggtatctgaggagatcatgcac
aacctggatacatgtgaggtgactgtgctaggagaggagctaaaccaggaacaggaaagc
ctggagattgacatgacacgattgcagcagaaaggcattgagatgagtagttccaacctg
ggcatgataatcacaggggttgataccatggctagttatgaggaagttttgcatttgata
cactacaggaactggcacacagtttccctctttgacaggaagttcaaactagtctgttct
gagcttaatggacgctatgtcagcaatgagttcaaagtggaggtgaatgttatccacaca
gctaacccagttgagcacgctaatcacatagctgcacagccacaatttgttcatccggtg
catcacacatttgtggatctctctggtcacaacttggctaaccctcacccattttcagtt
gttccaagcacagccactgtggtgattgtggtttgtgtcagtttcctggtttttatgatt
atcctgggagtgttccggatccgagccgctcatcagagaacgatgcgtgaccaggacact
ggaaaggagaatgagatggactgggatgactctgctttgaccatcactgtgaaccccatg
gagacctatgaggatcaacacagcagtgaagaggaagaggaggaagaggaagaagaaagt
gaagagggggaagaagatgacatcactagcgcagagtctgaaagcagtgaggaggaagag
ggagagcaggaggaggaccaacagaatgtgaatagacagcaacagctggaatgggatgac
tctaccctcagttattga
DBGET
integrated database retrieval system
