Dryobates pubescens (Downy woodpecker): 104306008
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Entry
104306008 CDS
T08526
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpub03041
]
104306008 (PTBP2)
Spliceosome [BR:
dpub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104306008 (PTBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
104306008
NCBI-ProteinID:
XP_009905235
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MSSMVVTANGNDNKKFKSDDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILML
KGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQ
AVTAVQATNAPISGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKII
TFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRD
YTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPG
VSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLA
MSHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIF
PPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRDHKMALLQMSTVEEAIQALID
LHNYNLGENHHLRVSFSKSTI
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatggtagttactgccaatggtaatgacaacaagaaattcaaaagtgatgat
aaaatggatggggctccttctcgtgttcttcatatcaggaaattgcctggggaagtgaca
gagacagaagttattgctttaggtttaccttttggtaaggtaaccaacatcctgatgcta
aaagggaaaaatcaggcctttctggaacttgctacagaagaggcagctatcactatggtc
aattactactctgcagtcacacctcatcttcgtaaccaacctatctatatccagtattcc
aatcataaggaactaaagactgataacacacttaaccagcgggctcaggctgttcttcaa
gcagtgacggctgtgcaggcaacgaacgctcccatcagcgggaccactgttagtgagagt
gcagtgactccagctcagagtccagtccttagaataattattgacaatatgtactatcca
gtaaccctggatgttcttcatcagatattctccaaatttggtgctgtattgaagataatc
acattcacaaagaataaccagttccaagctttactgcagtatggcgatccagttaatgca
cagcaagcaaaactagccttagatggtcaaaatatttacaatgcctgctgcaccctgcgg
attgacttttccaaactggtgaatttgaatgtcaagtacaacaacgacaaaagcagggac
tacactcggcctgatcttccctcgggtgacggacagccggcgctggacccagctattgct
gcagcgtttgcaaaggagacctctcttctagctgttccaggagctctgagtcctttggct
attccaaacgctgctgccgctgctgcagctgctgctgccggccgtgtgggaatgcctgga
gtttcagctggtggcaatactgtcctcctggttagcaatttaaatgaagagatggttacg
ccccaaagtctgtttaccctcttcggtgtttatggtgatgtgcagcgtgtgaagattttg
tacaataagaaagacagtgctcttatacagatggctgatggaaaccagtcacagctggcc
atgagccatctgaacggacaaaaaatgtacgggaagattattcgggttaccctttctaag
caccagacagtacaactacctcgggaggggcttgacgaccaaggcctgacaaaagatttt
ggtaactcgcctctgcatcgcttcaaaaagccaggctcaaaaaactttcagaacatattc
cctccttctgcaacgctgcacctctccaatattccaccgtcggtagcagaagaggatctc
cgcacactgtttgctaacactggaggcactgtgaaagcatttaaattttttcaaagagat
cacaagatggctcttcttcagatgtcaacagtggaagaagccattcaggctttgattgat
cttcacaattacaatctgggagaaaatcaccatctgagagtttctttctctaagtcgact
atttaa
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