Dryobates pubescens (Downy woodpecker): 104306084
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Entry
104306084 CDS
T08526
Symbol
LRRC16A
Name
(RefSeq) leucine-rich repeat-containing protein 16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104306084 (LRRC16A)
Membrane trafficking [BR:
dpub04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
104306084 (LRRC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
IL34
Spectrin_5
Cep57_CLD
Motif
Other DBs
NCBI-GeneID:
104306084
NCBI-ProteinID:
XP_009905322
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MEPAAANAQVLASCRAFLLTSRIPTKLELTFSYLEIQGVTSSKPGQLIMETEKCNVSMKM
ASSEDVNEVLAHIGTCLRKIFPGLSPVRILKKVTVEPSERLANLQALWDSQTVAELGPCG
GFSQMYACVCDWLGFPYREEVQWDVDTIYLTQDTRELNLQDFSHLDHRDLIPIVAALEYN
QWFTKLSSKDLKLSTDVCEQILRVVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSG
LHTINLASNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANSLITN
TLVYLDLSGNALRGDDLSSLYNFLAQPNAIAHLDLSNTECALDMVCGALLRGCLQHLAVL
SLSRTLFSHRKGKEVPPSFKQFFSSSLALMQINLSGTKLPPEPLKALLLGLACNHNLKEV
SLDLSSCELRSGGAQVLEGCIAEIHNITSLDISDNGLESDLSTLVVWLSKNRSIRHLALG
KNFNNMKSKNLTPVLDNLVQMIQDEDSPLQSLSLADSKLKTEVTIIINALGSNTSLTKVD
ISGNAMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVALEKNYTLRFMPIPMN
DASQALKTNPEKTEEALQKIENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVK
VQDHLNSLRNCGVDAVQEDVKSAERLMRDAKNSKTLLPNLYHLGGAAWAGANGSLSNPIQ
ETLESMAGEVTRVVDEQLKTLLESMVDAAENLCPNVMKKARIREDLIEASTEKISIPRTF
VKNVLLEQSGIDILNKISEVKLTVASFLSDRVVDEILDALSHCHHKLADHLTRRGKPLPQ
QESLEIELAEEKPAKRSIITVEELTEIERLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFE
MEFDLDKALEEVPIHIEDPPFPSSRPDKRTSGFISELPSEEGRKLEHFTKLRPKRNKKQQ
PSQAAVSAGVPPEGDQNGLMGRVDEGVDEFFTKKVTKMDSKRPSTKGSDSSEPSEAGDEK
KKRDSRKSGFLNLIKSRGSKSERPQTVTVAEEPSSPKVAAKSPAVDTSKKEVKPAEQNGG
TERSEELKTPDSLEEAQSDDAAKAERADSKGSPQGGRRYGVQVMGSGLLAEMKAKQEKRA
ASAQKKLGNDTTSRESFDTALSSERLDESGTVPKLQQTLPETRFASNKGDSISTSSEKNS
KAEPKAEAGAKARGSSNTPTSPKPPLQSTKPSLAGRPTVPQKPRSASRTEDAPESPSGPS
SPKVALLPPVLKKVPSDKEKDGQSSPSVRSFSQEAAKRSPGQQSHEFQEVKQRSLSKDGH
QGSKSSDSGEEADKDFIFV
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggagccagcagcagctaatgcccaggtgttggcatcatgtcgggcatttctgttaaca
tcccggattcccaccaagttggaactaactttcagctacttggaaatccaaggagtaact
tccagtaaaccaggtcagttgattatggaaactgagaaatgtaatgtctccatgaagatg
gcatcctcagaggatgtgaatgaggtgctggcacacattgggacctgcctccggaagata
ttccctggactctcacctgtgaggattctgaaaaaagtaactgtggagccttcagaaaga
ctggctaatctccaggccctgtgggacagtcagacagtggcggaactgggaccttgtgga
ggcttttcacagatgtatgcctgtgtttgtgactggcttggatttccctatagagaagaa
gtacagtgggatgtcgatacgatttacctaacacaagataccagagagctgaatttgcaa
gacttcagccaccttgaccacagagacttaatacctatagttgcggctctggaatacaat
caatggtttactaagctgtcctccaaggatctgaaattatccactgatgtctgtgaacag
atactgcgggtggtgagcaggtccaatcgattggaagaactggtattagagaatgccggg
cttagaacagattttgcacagaaactagccagtgccctagcccataatcccaactcagga
ctccatacgatcaaccttgctagcaatccacttgaagatagaggtgtgtcatctttgagc
atccagttcgccaaacttccaaagggactgaaacatttaaatttatctaaaacctccttg
tcacctaaaggggtgaatagcctttcccagtcactgagtgccaactcgctgatcacaaac
acactcgtctatcttgacctctcagggaacgcgctccgcggtgatgatctctcaagcttg
tacaattttttggcccagccaaatgccattgctcacctggatttatccaacacggagtgt
gcactagatatggtatgtggagccctccttcgtggttgtcttcagcatttagctgtcctt
agcctctctaggactcttttctctcacagaaaaggaaaagaagtccctccctccttcaaa
cagtttttcagcagctcacttgctttgatgcagattaatctttcgggaactaaactccct
cctgagcctctaaaagcacttttattaggtctggcttgcaatcacaatctgaaggaggtg
tctttagacctcagtagctgtgagttaagatcgggaggtgcacaagtcttggaaggatgc
atagcagaaatacacaatatcaccagcctagatatttcagacaatggcctagagtctgac
ctctcaacccttgtagtctggcttagtaaaaaccgatcgataagacacttggccttaggc
aaaaactttaacaacatgaaatccaaaaatctcactccagtacttgataatttagttcag
atgattcaggacgaggattcacctctgcagtcattgtccctcgcagattccaagctgaag
actgaggtcaccatcattattaatgccctgggcagcaatacttctcttacaaaagtagat
atcagtggaaatgccatgggagatatgggagcaaagatgctggctaaagctctgcagata
aacaccaagctcagaactgttatatgggacaagaataacatcactgcgcagggcttccag
gacatagctgtggcactggaaaagaattatactttgagattcatgcccataccgatgaat
gatgcttcccaagcgcttaaaacaaaccctgagaagacagaagaggcactgcaaaagata
gaaaactacttgcttcgtaatcatgagaccagaaagtacctacaggagcaagcgtatcgg
ctgcagcaaggcattgtcaccagcaccactcagcagatgattgacagaatatgtgtaaaa
gtgcaagatcatctcaactctttaagaaactgtggtgtggatgctgtacaggaagatgtc
aaatctgcagaacgacttatgagggatgccaagaactccaaaacgctcttaccaaatctg
tatcacctcggtggagctgcttgggcaggagcaaatggttcactctccaatccaatccaa
gaaacacttgaatccatggctggagaagtcacaagagttgtggatgaacaacttaagaca
ctccttgagtctatggtggatgcagcagaaaacctttgcccgaatgtgatgaagaaagct
cgaatccgtgaagacctgatcgaggcaagcactgagaagatttccatcccacgcactttt
gtgaaaaatgtcctcttggagcaatctggcattgatatcctcaataaaattagtgaagta
aaactgacagtggcttctttcctgtctgaccgagtcgtagatgaaatcctggatgcactt
tcccactgccatcacaaactggctgaccacttgaccagacgtggcaaaccacttccacag
caagaatcactagaaatagagttagctgaagaaaagccagctaagcgctccatcatcacg
gttgaggagttgacagagatagaacgtttggaggatctagacacctgtatgatgactcct
aaatcaaaaaggaaaagcatccacagtagaatgcttcggccagtatccagagcttttgag
atggaatttgatctagataaagcactggaagaagtacctatccatatagaagacccacca
tttccttccagcaggccagacaaaagaacttctggattcatttccgagctgccatcagaa
gaagggagaaaactggaacactttacaaaattaaggcccaaaaggaataaaaagcagcag
cccagccaagcagcagtgtctgctggagtgcctccagaaggggatcagaacggcctcatg
gggagggtggatgaaggagtggatgaatttttcacgaagaaagtgacaaaaatggattca
aagagaccatcaactaaaggttcagacagcagtgagcccagtgaagcaggggatgagaag
aagaaaagagactcaaggaagagtggcttccttaacttaattaaatcaagaggatccaaa
tctgaacgtccccagactgtaacggtggcagaggagccttcctcacccaaagttgctgca
aaaagtccagctgtggacacaagcaagaaggaggtaaagcctgcagagcagaatggtggt
acagagcgctctgaggaattaaagacaccagactcactggaggaggcacagtcagacgat
gcagcaaaagctgagagggctgacagcaaaggaagcccacagggaggccggaggtacggc
gtgcaggtgatgggcagtggacttctcgcagaaatgaaagccaagcaggagaagagagca
gcctctgctcagaagaaacttgggaatgacacaacttccagagagtcctttgacacggca
ctgagctcagaacgactggatgaaagtggtacagtgcctaaactccagcagacccttcca
gagactcgatttgcctcaaataaaggagactccatctcaacatcatcagaaaaaaactca
aaagctgaaccaaaggcagaagctggtgcaaaggcaagaggttcttccaatacaccaacc
agcccaaagcccccactgcagtcaacaaagcccagcctggcaggacgacccacggtgccg
cagaaaccacgctctgcctctcgtactgaggatgctccggagtctccctctggccccagt
tccccaaaagttgccctgcttccacctgtgctgaagaaagttccttctgataaggaaaag
gatggccagagcagcccctcagtcagatcattttctcaagaagctgcgaaaagaagccct
gggcagcagtctcatgagttccaggaggtgaagcagaggtccctaagtaaagacgggcat
cagggcagcaagtcgagtgactctggtgaagaagcagacaaggattttatttttgtgtag
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integrated database retrieval system
