Dryobates pubescens (Downy woodpecker): 104306095
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Entry
104306095 CDS
T08526
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104306095 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104306095 (PAN3)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104306095 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
104306095 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
104306095
NCBI-ProteinID:
XP_009905333
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MMQRMTNSSSSPSLLNDSAKQYAGHDPLSSPSSSLFNDFAALSVSQRRKLAKPAFPSFIT
DLEDRYNTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTE
NNLQTPNPSASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSA
GSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSTGQVIQKETVG
GTTYFYTDTTPAPVTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLI
TMAQIDQADVPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYC
LRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMM
SRHFNDPSADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACR
VMDPTKILVTGKTRLRVNCVGVFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACN
SLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAA
QMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFH
QVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELI
AAANGQL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaggatgacaaatagcagcagctcccctagccttctcaatgacagtgccaag
cagtatgcaggccatgatccactatcttcaccaagttcatccttgtttaatgactttgct
gccctcagtgtgtctcagaggaggaagctggcaaaaccagcgtttccttcctttatcact
gacttggaggacagatacaatacagtcttgcccaggaagtatcgactggggatgctggat
gagaggatagttccggtgggatcaaaagcaagaaaatcaaagaaccctattggctgtctg
gctgacaggtgtaaaacaggagtacccatcaatatggtttggtggaacagagtcacagaa
aacaatttacagacaccaaatccttctgcaagtgagtttattcctaaaggaggatcaacc
tccaggctgagtaatgtatcccagtcaagtatgtctgccttctctcaagccctgttctct
cacccctccatgggaagtcctgctactgctgggctagcaccaggaatgtcactgtcagca
ggatcttctcctcttcattcccccaaaataactcctcatacatctcctgctcctcgaaga
agaagtcatactcctaacccagcaaactatatggtgcctactagtgcctctgcttctgtt
gctaatgctgtgtctcagcctccatctactggccaggtgatccagaaggaaacagtgggt
ggaacaacatatttctacactgatacaactccagcacctgtcacaggaatggtatttcca
aactaccacatttaccatccagctgcacctcatgttgcttatatgcagccaaaagcaaat
gcaccttccttcttcatggcagatgagctcagacaggaactgatcaacagacacttaata
actatggcccagattgatcaggctgatgttcctgcagttcctgcggaagtggacagctac
cacagtctctttcctttggaaccactgccaccacccaataggatacagaaaacaagcaac
tttgggtacattacatcatgctataaagctgtaaatagtaaagatgatctgccctattgc
cttcggaggatacatggttttcgtcttgttaacacaaagtgcatggtactggtcgacatg
tggaaaaaaattcagcactcgaatatagtcactttgcgtgaagtgtttaccacgaaagca
tttggagaacattctcttgtgttcgcatatgattttcatgctggaggtgagactatgatg
agcagacacttcaatgaccctagtgctgatgcttatttcacaaaacgaaaatggggtcag
catgatggacctctaccacggcagcatgctggattgcttccggagtctttgatatgggca
tatattgtgcagctcagctctgcattacgaaccattcatacagcgggactggcgtgtcga
gttatggatccaacaaagattcttgtaacaggcaaaacaaggttacgagttaattgtgtt
ggagtcttcgacgttttgacatttgacaacagtcaaaataatccactggcattaatggct
cagtttcagcaagcagatctgatctccctggggaaagttgtgttggctttggcttgcaat
tctttgtcaggaattcagagagagaatttgcagaaggcaatggaactggtgacaatcaac
tattcctctgatctgaagaatctgattttgtatctgctgactgaccagaacaggcttcgc
agtgtaaatgatatcatgccaatgattggtgcacgattctatactcagttggatgctgct
caaatgcgaaatgatgttatagaggaagaccttgcaaaggaggtgcaaaatggaaggttg
ttcaggcttctagcaaaactgggaacaatcaatgaaaggccagagtttcagaaggaccca
acgtggtcagaaactggagacaggtatttactaaagctctttcgcgatcaccttttccat
caggtgacagaagcgggtactccttggattgacctcagtcacattatctcatgtcttaac
aagttagatgctggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgta
cttgtggtaacttacagcgatttaaaacgctgctttgaaaatacttttcaagaactgatt
gcagccgcaaatggtcagttgtag
DBGET
integrated database retrieval system
