Dryobates pubescens (Downy woodpecker): 104306182
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Entry
104306182 CDS
T08526
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104306182 (JMJD1C)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104306182 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
FYVE
C1_2
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
104306182
NCBI-ProteinID:
XP_009905439
LinkDB
All DBs
Position
Unknown
AA seq
2356 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQTAASKQNSHQ
HQQQRNTRPNKRKGSDSSMPDEEKTKEERCDYIGRGENPKNKTKNFVNKRRKPEEDEKKL
SMKRLRTDNISDYSESSDSEISTKRLTDSEQNSENELKSKNTSKLNGEEKSQTIEGVEQT
LTDRQSPWDEIEEDKKHEETERLKSSVLDQQEKSSLHAAEQPTPYEQNSKDPHVQECNAE
KHHPAEVKNEQFVPRPPTPKCVVDITNENNSEKETQDNAAASTFGLQTVQKIESHSSDLK
QQFANANFVEARKQEADQSWVSSVVNKTDLIQPGLVKALSVNEHLNPEKEKVQFGSFMSS
LNVASLAEESKLHKQSPVSDSVKSKPSASVDHPKTKSPDVKPKFTQSSDTVKSKVSSQNS
HATGLTRSANKNDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQETG
TNHISPYLHQHNYPLHSSSHRTCLNPNAHHPALTGSSHLLAGSSAQAPLSAINTHPLSSA
SHHSVHHPHLLPAVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLL
GQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNTEASLRRNTPSPWL
HQPTPVTSADSLGLLSHIPVRPSSADPLRPLKLTTHSSPPLSKSIVEHHKEELERKTFIE
PLRSVTTAPVKTELEQGRTQMGKESHMHRHFADPMLNQMPRPPQETGERLSKYKEEHRRI
LQESIEVAPFTAKIKALEGERENYSRVTSLSSSPKSQSVKYDKDAERSVSELYKMKHSVP
QSLPQSNYFTTLSNSVVNEPPRSYPSKEASSAYVDKQANCPSTAASPQSLPSYISSLSKP
PPLIKHQPECEGSAGKIPEQLSQSVQSHSVNSFRSDSRSPTQLSVSSSNTLRSMPALHRA
PVFHPPVHQNLEKKESSYSSLSPPTLTPVQPVNAGGGKIQELQKPPTLVPEPKEAQAVYK
GTSEQNLSEMWKSSNAPSNEKVDWHAERTNVKSQSATASVIVRPSSSMKYDSTAVMQSAL
KDRLSERSSAVTNQADCLKTAEARETGRVILPNMNSESARTQYEKKFPVVSQGSVPPAVT
PTTTMICSTKTDVTTSAATTTSVSSWGSSEVTYSLSNMVLACVPLESTASRDTSQAVGQA
QGCKVSTPAPVTPTGAGKAGSAAQPSTGFSTSTDFIHLKKHKAALAAAQFKSSNSSEAEC
NSVKNQTFSTSLSLDNAVGCNAANKANSVGSGQTSQASQPNYHTKLKKAWLTRHSEEDKN
TNKKENSGNSVSEIIKPCTVNLIASTSNDLQNNIDSKILVDKFAKEEKHPRRKAKRTYES
GSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDAEEEVKPNGVLSRSAKEKSKL
KLQSGSNTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEE
PTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKY
ILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCG
FVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHHIR
EKFEMKSHCQCTSKQSTQAGKLPAMNGVSQVLQNVLNHSNKISLCTPESQQQSTPQKSET
NGNASPRSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEEKDQDN
LESPNCKSSPPASQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASGKSGRT
MPNILDDIIASVVENKIPPNRAPKINVKSEIKDEPKDDKNCVQDECSKRYSDIQYSWICD
KHVLWLKDHKNSNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILN
CKDSIISNTNVKEFWDGFEDVSKRQKIKNGETALLKLKDWPSGEDFKAMMPARYEDLLKS
LPLPEYCSPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVN
ILVYVGIAKGNGVLSKSGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIRE
FLQKIAKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTIIQFLGDAIILPAGA
LHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMV
RALKIHEGEMEDMDEN
NT seq
7071 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccgtactccttaaatggttacagggtgagagtgtacagacaggattctgcc
acccagtggttcactggtatcatcacccatcatgatctctttacccgcactatggttgtt
atgaatgaccaggtgttagaacctcagaatgttgatccttctatggttcagatgaccttt
ctagatgatgttgttcactctttgttgaaaggtgaaaatattggcatcacttcacgccga
cgatctcgttccaaccagaacagcaacacagtccacggtcattatacacgtgcacaagca
aatagtcccagaccagcaatgaattcccaaactgcagcatcaaaacagaattctcaccag
caccagcaacaaaggaatactcgtccaaataagaggaagggctctgatagcagcatgcct
gatgaagagaagacgaaagaagaaagatgcgattatatcggtcgaggagaaaaccccaaa
aacaaaaccaaaaactttgttaataagagaagaaaacctgaagaggatgaaaaaaaatta
agtatgaagaggctgcggacagacaatatctcggattactctgagagcagtgactcggaa
atttcaactaaaagattaacagattcagagcagaattcagaaaatgagttaaaaagcaag
aacacttcaaagctaaatggagaagaaaaatcccaaactattgagggagtagaacagaca
ctaacagataggcagtctccctgggatgaaatagaggaggataaaaaacatgaggagaca
gaaagactgaagtcatctgtcttagatcaacaggaaaaatcttctctccatgcagcagag
cagccaacaccttatgaacagaattccaaggatccacatgttcaagagtgcaatgcagaa
aaacatcaccctgcggaagtaaagaatgagcagtttgtacccaggcctcctactccaaaa
tgtgttgttgacattactaatgaaaacaactctgaaaaggagacccaagataatgctgct
gcgagtacctttggtttgcaaacggttcagaagatagaatctcacagcagtgatttgaaa
cagcagtttgcaaatgcaaattttgttgaagcaagaaaacaggaagctgatcaaagctgg
gttagcagcgttgttaataaaacagatttgatacagcctgggcttgtaaaagcattatca
gtaaatgaacacttaaatcctgaaaaagaaaaagtgcagtttggctcctttatgtcttcg
ttaaatgtagcttctctagcagaagagagtaaactgcataagcaaagtccagtctctgat
tctgtgaagtcaaaacctagtgcttcagttgatcatcctaaaacaaagtcacctgatgtt
aagcctaaattcacccaatcttctgatactgtgaagtctaaggttagttcccaaaacagc
catgctaccggattaacaaggtcagccaataaaaatgatcatgatttgcctaggtctagt
tttcatccagttccagctagagttagtgcgctagaagctactaaaagtcctcttatcatt
gacaagaatgaacatttcacggtgtacagggaccccactctgattggacaagaaacagga
actaatcacatttcaccttatttgcatcagcataattatcctctgcattcctcatcccac
cgaacctgtttaaatccaaacgctcatcatcctgcattaactggttcatcccatctgcta
gctgggtcttcagctcaggcgcctttgtccgctattaacactcacccccttagtagtgca
tctcaccattcggttcatcaccctcatctacttcctgcagtgttacctggagtgcctgct
gcctccttgctgggtggccacccacgactagagactgctcatgctagcagcttaagccat
ttggcattagcacaccagcaacagcaacagatgttacaacaccagtctccacatcttctt
ggacaagctcatccttctgcttcctataatcagctagggctttatccaattatttggcag
tatccaaacggaacacatgcttactcaggactcggtctgccctcctccaaatgggtccac
ccagaaactcctgttaacactgaggcttccttgagaaggaatactcccagcccatggttg
caccagcccaccccagtgacctcagctgacagccttggtttactgagtcacattcctgtg
cgaccctccagtgcagatccccttcgacctctcaaactgaccacgcattccagtccacca
ttgtccaaaagcattgtagagcatcacaaagaagaactggagaggaaaacatttattgag
cctttacgttctgttacaactgccccagtgaagactgagttagagcaaggcagaacacag
atgggaaaggagagccatatgcacagacattttgcagatccaatgctgaaccagatgcca
aggccaccacaggagactggggagcgactgagcaaatacaaagaagaacacaggcggata
ctccaagaaagtattgaagttgctccttttacagctaaaataaaagcgctagagggggag
agagagaactattccagggtaacatccttatcttcaagtcccaaaagccagtcagtaaaa
tacgacaaagatgctgaacgctccgtgtcagaactgtataaaatgaagcattcagttccg
cagagtttgccgcagagcaactatttcaccactttgtccaacagcgtagtaaatgaacca
ccaaggtcatacccctcaaaggaagcttcaagtgcgtatgttgataagcaagccaattgt
ccttcaacagcagctagtccccagtctctcccctcttatatttcttctctttcaaaaccc
ccacctttaattaagcaccagccagaatgtgaaggctctgcaggcaagatacccgagcag
ctttcacagtcagtgcagtctcactctgtaaattccttcagaagtgacagcaggagccct
actcagttgtcagtctcatcttcaaatacactccggagtatgcctgccttgcatagagcc
cctgtgtttcacccccctgtgcaccagaacctggagaagaaggaaagcagttacagtagc
ctttcacctccaactctaacccctgttcaacctgttaatgctggtggtggcaaaatacag
gagctgcagaagccaccaacactggtacctgagccgaaggaagctcaggctgtttacaag
ggcacttctgaacagaatttatcagaaatgtggaagtccagcaatgccccaagtaatgaa
aaagtggattggcacgctgagagaacgaatgtaaagtcacagtccgctacagcgtctgtt
attgtgcgtccttcttctagcatgaaatacgatagcacagcagtaatgcagtctgctctc
aaagatcgacttagcgagagatcttcagctgtgacaaatcaagcagattgcctgaaaaca
gcggaagctcgggagactggaagagtcattctgccaaatatgaactcagagagtgctcgc
acacagtatgagaagaagtttccagttgtctcgcaaggcagtgttcctcctgctgtcacc
cctaccaccactatgatctgcagtactaaaaccgacgtcaccacatcggcagcaacaact
accagtgtgtccagctggggcagttcagaagtgacttactccttatcaaacatggtgttg
gcctgtgtgccgctggagagcactgcttcgagagacacgagtcaggcagtggggcaggcc
cagggatgcaaggtcagcactccagctccggttacacccactggtgctggcaaggcaggc
agtgctgctcagcccagcacggggttctccacctccaccgatttcatccatttgaaaaag
cacaaggcagcgttggctgcagctcagtttaaaagtagtaacagcagtgaggccgagtgc
aactctgtgaaaaatcagacattttcaacctctctctccctagacaatgctgtcggctgt
aatgcagcaaacaaagccaactctgtaggcagtgggcagacttcccaggcaagtcaacca
aactaccacactaaactgaaaaaggcttggctgacaagacattcggaggaagataaaaac
actaataaaaaagagaattcagggaacagtgtttcagaaattattaaaccatgtactgtc
aatttaatagcttctacatcaaatgatttacaaaataacatagatagtaaaatcttggta
gataagtttgcgaaggaagagaagcacccacggagaaaagcaaaacgaacttacgagtct
ggctctgaaagtggagactctgatgaaagtgagagcaagtcagagcaaaggactaagcga
cagcctaagccaacttacaaaaagaaacaaaatgacttgcagaaaaaaaagggtgatgca
gaggaagaagtaaaacccaacggtgttcttagcagaagtgccaaagaaaaaagcaagctg
aagctgcagagtggcagtaacactggtataccccgctcagtgttaaaagactggcgcaaa
gtcaagaagttgaagcaaactggagagtcctttttgcaggatgattcttgctctgaaata
ggaccaaatttgcaaaaatgcagagaatgtaggttaataagaagtaagaaaggagaagaa
ccaactcactcaccagtattttgtagattttactacttccgacggttatcttttagcaag
aatggagtggttaggatagatggtttctcctctcctgatcaatatgacgatgaggcactg
agtttgtggacacatgaaaactatgaagatgatgaactggacctagaaacatctaaatac
attctagatatcataggcgataaattttgtcagctagtaacatctgagaaaacagccatg
tcctgggtgaagaaagatgccaaaattgcatggaagagagcagtgagaggagtccgtgag
atgtgtgatgcgtgtgaagccacattatttaacattcattgggtctgccaaaaatgtgga
tttgtggtctgcctagattgttacaaggcaaaggaaagaaaaagctccagagataaggag
ttgtatgcctggatgaagtgtgtgaaggggcagcctcatgatcacaaacacctgatgcca
acgcagattattccaggctctgttttgacagatcttttagatgctatgcaccacattaga
gaaaaatttgaaatgaagtcccattgtcagtgtaccagcaagcagagcacacaagctggc
aagctccccgcaatgaacggtgtctctcaggttttgcagaatgtccttaaccacagtaat
aaaatttctctgtgcacgcctgagtctcaacagcagagtactcctcagaagtctgagaca
aatggtaatgcaagtccaaggagtgatgtaagcacagacagcaagttaacaccacctgaa
tcccagtccccgctgcactggttagctgaccttgcagagcagaaagccagagaagagaag
aaagagaacaaagaatgtccttctggaaaacattcaaaggaagagaaagaccaggataac
ttggagtccccaaactgtaaaagctcccctcctgcatcccagaacaatgagcagggctca
accttacgggatttattaactacaacagcaggcaaactccgtctaggttctacagatgct
ggtattgcctttgctccagtttactctacaggaacagcaagtggcaagagcggaaggact
atgccaaacattcttgatgacataattgcttcagtagtagaaaacaagattccaccaaat
agagcaccaaagataaatgtgaaatctgaaattaaagatgagccaaaggacgataaaaac
tgcgttcaggatgagtgcagtaaacggtacagcgatattcagtattcctggatctgcgat
aagcatgttctgtggctcaaagaccataaaaacagcaacaactggaagctgttcaaagag
tgctggaagcaaggaaggcctgttctggtgtctggtatgcacaagaaaatgaacttcagc
ctgtggaaagcggagtcaattagtctagattttggaaaccagcaagctgatatcttgaac
tgcaaagacagtattatttcaaacaccaatgtcaaggagttctgggatggttttgaagat
gtttcaaagcggcagaaaattaaaaatggggaaacagctctactaaaactgaaggattgg
ccttctggggaagacttcaaggctatgatgccagcaagatatgaggacttgctaaaaagt
ttacctttgcctgaatattgtagtccagaaggaaaactaaacttggcttctcatctgcca
ggattttttgtccgtccagatttgggacccagactatgcagtgcttatggtgtggctgct
actaaagaccatgatataggaaccacaaatctccatattgaagtttctgatgtcgtgaac
atccttgtttatgttggtatagcaaaaggaaacggagtactttccaaatcaggagttctg
aagaagttcgaagaagaagatttggatgaccttttaagaaagcggttgaaagactcgagt
gaattacctggtgctttatggcacatctatgctggcaaagatgctgacaagataagggag
tttctgcaaaagatagcgaaagagcaaggcttagaggttttaccagaacatgatccaata
cgcgatcagagttggtacgtgaacaaaaaacttcgccaaagacttctggaggaatacgga
gtaaaaacctgcacaattattcagtttcttggtgatgccattatcctaccagcaggagcc
cttcaccaggtgcagaattttcacagttgcgttcaagtaactgaagactttgtgtctcca
gaacatcttgtgcagtcatttcacttaacgcaggagctgaggctgtcaaaggaagaaatc
aattacgatgataaactgcaggttaaaaatatcttgtatcatgcagttaaggaaatggtg
agagctctgaagattcatgaaggtgaaatggaagacatggatgaaaactaa
DBGET
integrated database retrieval system
