Dryobates pubescens (Downy woodpecker): 104306203
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Entry
104306203 CDS
T08526
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpub03009
]
104306203
03036 Chromosome and associated proteins [BR:
dpub03036
]
104306203
Enzymes [BR:
dpub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104306203
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
Pre-60S particles
Helicases
104306203
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104306203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
104306203
NCBI-ProteinID:
XP_009905459
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MAHVQFCIHQYPGLPPQGCSQSFHPRSEDSLHLAFSNLMKFNTDPSLKPVQAGSQEKKPK
RREKVKRSGNAEAEQNQPEESGLGDGELEPPMAKKTKKAKEKANGLVGESNGSERTVKLS
SAVISPTEQSASGDTDTGEQDSDAEELTEEEKEGAFSNFPLSQNTINLLKARGVKYLFPV
QVTTFQPIYDGKDVIAQARTGTGKTFSFAVPLIEKLQSVSQDGRRGCAPKVLVLVPTREL
ATQVARDFKNLTRKLSVACFYGGTPYKEQLDLLKSGIDILVGTPGRIRDHIQNSKLDLSD
VKHVVLDEVDHMLDMGFAEQVEEILGFAYKRGSENTPQTLLFSATCPQWVYDVAKKYMKD
EYEKIDLIGKKTQRTATTVEHLAIQCRSSQRAGVLGDIIQVYSGSRGRTIVFCETKKEAN
ELAMNASLKQDAQSLHGDIPQKQREITLKGFRNGVFEVLIATNVAARGLDIPEVDLVIQC
SPPKDVDSYIHRSGRTGRAGRTGVCICLFQRREEDLLKQVEHKAGITFKRVGVPTATDVI
NASSNDAKKLLEAIPPAAVDYFRKSAQELIDEKGAVAALAAALAHISGAAYVQQRSLLNS
TAGFVTMVLKCSIEMHTMGYAWRGLKEQLGDEVDGKVSSMRFLKGKMGVCFDIPVDELGN
IQEQWSDTRRWQLSVAKELPELEELPQEAGRGFSRFGNGRQGGSGGGFKKNNWYKNGNRG
HDFNRSLE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgtccagttttgcattcaccagtatccaggtcttcctcctcagggctgctct
caatcctttcatccccggtctgaagactccttgcacttggccttttcgaatctcatgaaa
ttcaacacggacccatctctgaagcctgtccaggcggggagccaggaaaagaagccgaag
cggcgggagaaggtgaagcggagtggtaatgccgaggccgagcagaatcaacccgaagag
agcgggctgggcgacggtgaacttgagcctcccatggccaagaagacaaaaaaagccaag
gaaaaagccaacggtttggttggagagagcaatggctctgagcgtaccgtgaaactttcc
tctgctgtgatatccccgacagagcagagtgcctccggcgacacggacactggagagcag
gacagcgacgccgaggagctgacagaagaagaaaaagaaggcgccttctccaatttccct
ctctcccaaaacaccatcaaccttctcaaagctcgaggtgtcaaatacctgttccctgtg
caagtgacgacttttcagcctatctatgatggcaaagatgtaattgctcaagctcgaaca
ggaactgggaagactttttcttttgctgttccgctgattgaaaaactacagagtgtctca
caagatggaaggagaggctgtgcaccaaaagtgctggttcttgttccaaccagggaactg
gccactcaggtagccagagacttcaagaatctcaccaggaagctgtcagtggcttgtttt
tatggaggaactccatataaagagcagcttgatcttcttaaaagtggcatcgatattcta
gtgggaactcctggacgaatcagagaccacattcaaaatagcaagctggatctttccgat
gtgaagcatgttgttttggatgaagttgatcacatgttagacatgggctttgctgaacaa
gtggaagaaatcttaggatttgcttataaaagaggttctgagaacactccccagacacta
ctgttttctgcaacttgtccacaatgggtgtatgatgtagcaaaaaagtacatgaaagat
gaatatgaaaagattgacttgattggaaagaagactcagaggactgccacgactgtggaa
cacttggctatacagtgtcgctcatctcagagggcaggggttcttggggatatcattcaa
gtctacagtggcagccgtgggaggaccattgtcttctgtgagaccaaaaaggaagcaaat
gaactggctatgaatgcttcacttaaacaggatgcccagtcattgcatggtgacattcct
cagaaacaaagagaaattacgttaaaaggctttagaaatggtgtgtttgaagttctgatt
gcaacaaacgtagctgcccgtggcttggatattcctgaggttgaccttgttatacagtgt
tcaccaccaaaagatgttgattcctacatccatcgttctggacggacgggtcgagctgga
cggactggcgtctgtatttgtttatttcagagaagagaagaagatcttttgaagcaagtt
gagcacaaagcggggattacttttaagcgtgtgggtgttcctactgctacagatgtaatt
aatgcttcaagtaatgatgccaaaaagttgttggaggccattcctcctgctgcagtcgac
tacttcagaaaatctgctcaagagctcatagatgaaaaaggtgcagttgctgccctggct
gcagctcttgcccatatttctggggcagcttacgtacagcagcgctccttactcaactcg
actgcaggctttgtgaccatggtgttgaagtgttcaatagaaatgcataccatgggctat
gcctggcgaggactcaaagaacagcttggtgatgaagtagatggaaaagtttcctcaatg
cgtttcctcaagggaaagatgggggtgtgctttgatatccctgttgatgaactgggtaac
atacaggaacagtggagtgacacccggcgctggcaactgtcagtggcaaaggaattgcct
gagctagaagagctcccccaggaggcaggacgagggttctccaggtttggaaatgggagg
caaggtggcagcggcggtggtttcaagaagaacaactggtataagaatggaaaccgagga
catgattttaacaggtcacttgagtag
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