KEGG   Dryobates pubescens (Downy woodpecker): 104306310
Entry
104306310         CDS       T08526                                 
Symbol
CUX1
Name
(RefSeq) protein CASP
  KO
K09313  homeobox protein cut-like
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dpub03000]
    104306310 (CUX1)
Transcription factors [BR:dpub03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain CUT
    104306310 (CUX1)
SSDB
Motif
Pfam: CUT Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 104306310
NCBI-ProteinID: XP_009905572
LinkDB
Position
Unknown
AA seq 1480 aa
DLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQR
MHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQK
LQNDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKAD
EIEMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSS
LEVELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKG
QADYEEVKKELNILKSMEFAPSEGSGAQDAAKPLEVLLLEKNRSVQSENATLRITNSDLS
GSARRKGKDQPESQRPATLPASPPSQLLRNAGEQASNTNGTHQFSPTGLSQDFFSSSLAS
PSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSIPSQSPLQQSP
DVNGMAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVS
EILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPK
RRNGAEGNITTRIRTTETGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIR
SILQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKH
SSVTDSSISALQNLSGLKKEPQEAPVLELHGISDSAQGMLRHVKNELGRGGVWKDHWWNT
VQHERRNTALPEDVKVEEASGGKEKVSNQTRPDRSQLQGPSSSEYWKDCPNAESPYSQSS
DLSMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVK
EKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQC
VLPAQGQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTEL
VQQPCPNIDTSKEGKAQEPSEPPPSESQASTPLPLSGHSALSIQELVAMSPELDTYGITK
RVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPN
NVEKLMDMKRMEKKAYMKRRHSSVSDSQPCESSSAGIDYSQGASPQPQHQLKKPRVVLAP
EEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQ
SQAGSSDSPSARSSRAAHSSEGDSWDGVDAEGPAEGKASGPEAEEYSNATTKSQGGSAES
AFEAGEEAPQGTARSSEKAEPFQAESLEDTDDEGRLRAPRQGSPPAPPRPGEAPETLPNS
ATEGDASTSAASTSVLTGESSYKPKESSEKISSVPSTSSTPASGSQKANSLQSLFGFSEA
ASSRNTRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF
NT seq 4443 nt   +upstreamnt  +downstreamnt
gacctgcgcaaacaggtagctccattactgaagagtttccagggagagatcgacgcgttg
gggaaacggagcaaagaagccgaggcagccttcttgaatgtttataagagattaattgat
gttccagatcctgttccagccttggatttaggacagcagcttcagctgaaggttcaacgc
atgcacgacatcgaaaccgagaaccagaagcttagggagaccctcgaggagtacaacaag
gaattcgccgaggtgaaaaatcaggaggttacaataaaagcacttaaagagaagatccgc
gagtatgagcagaccctgaagaaccaagcggagaacatagccctggagaaggaacaaaag
ctgcagaatgattttgcagagaaggagaggaagttgcaggagacacagatgtccacagcc
tccaagctggaagaagccgaacacaaggttcaagcgttgcaaacagccttggaaaaaacc
agaacagagctatttgatctgaaaacaaaatacgatgaagaaactactgcaaaggctgat
gaaatcgagatgatcatgacagacctcgaaagagcaaaccagagggcagaggtggctcag
agagaggcagagaccttaagggagcagctctcctcagctaacaaatctctccaactcgct
acgcagatccagaaggctcctgatgtggagcaggccatcgaggtgctcacgcggtccagc
ctggaggtggagctggctgccaaggagagggagatcgcccagctggtagaagatgtccag
agactccagggcagcctcaccaagctgcgggagaactccagcagccagatctcacagctg
gagcagcagctgacagccaagaacagcacactcaaacaactggaagagaaactgaaggga
caggctgattacgaagaggttaagaaagaattgaacatcttgaaatccatggagtttgca
ccctccgaaggctctggtgcgcaggatgcagctaaaccgctggaggtgctgctgctggag
aagaaccgctcggtgcagtcggagaacgccacgctgcgcatcaccaacagtgacctcagc
gggtcagccaggagaaaagggaaagaccagcctgagagtcagcgtcctgcaaccttgccg
gcctcccctccttctcagttgctccgcaacgcgggggagcaggcttccaatactaatggt
acacaccagttctcaccaacgggtttaagtcaagactttttcagctcatccctggcgagc
cccagcttacccctggcctccacaggaaaatttgcactaaactctctcctccagcgacag
ctaatgcagtccttctactccaaggcaatgcaggaagcaggaagcacaagcatgattttt
tcaacaggtccttacagcacaaactccataccttcccaaagtccattacaacaaagcccg
gacgtaaatggcatggccccctcccccagccagtcagaaagtgctgggagcatctctgaa
ggcgaggagatagacacggccgaaattgcccggcaggtgaaagagcagttgatcaagcac
aatattggccagcggatatttggacactatgtgttgggactgtcgcagggctctgtgagc
gagatcctggcccggccaaagccatggaataaactgactgtgagaggcaaggagccattt
cataagatgaagcagttcctctcggacgagcagaacatcttggctcttcgcagcatccag
ggtagacaaagagagaatccaggccagaacctgaacagactatttcaggaagtaccgaaa
cgaagaaatggggctgaaggtaatataaccacaagaatccgaaccacagagactggctct
gatgaagccatcaaatccatcctcgaacaagccaaaagggagctgcaagtacagaaaaca
gctgagccggctcagccgccttctgcatctagcagtggcaattctgatgatgctattcga
tccattctgcaacaagcccgacgggaaatggaggcacagcaggctgcccttgaacctgcc
ttaaaaacaccacccttatctcaagctgacatttctatcctctcccccaaactagtatct
acacctgcaatgtcttcggtttccagctattctcctttggccatatccctgaagaaacat
tcatctgtcactgattccagtatctctgcattgcagaacctctctgggctcaaaaaggag
cctcaggaggcacccgttttagagcttcatggcataagtgattctgcccagggtatgttg
aggcatgttaaaaatgagttgggacgtggtggtgtttggaaggaccattggtggaatact
gtgcagcatgagagaagaaatacagctctgcccgaagatgtaaaagttgaggaagccagt
ggtggaaaagaaaaggtcagcaatcagactaggccagatcgtagccagctccaaggacca
tcttcttcagagtactggaaagattgtccaaacgctgaatctccgtactcccagagttcg
gacttgagcatgactggggcgagtcgcagcgagacgccacagaatagccctctcccttca
tcccctatcgtgtctttgtccaagccatccaaaccttcagttcctccactgacacccgag
cagtatgagatttatatgtaccaggaggtggatacgatagagctaacgcggcaggtcaag
gaaaagctagcaaagaatggcatctgccagaggatctttggggaaaaggtgttggggctg
tcccaaggaagtgtcagtgacatgctctccaggccaaagccatggagcaaattgacccaa
aaaggccgagaaccatttattcgtatgcagctctggttgaatggtgagctgggacagtgt
gtcctgcctgcacaagggcagcaacaaggacaagtccttcactctgtgacatcattacag
gattccctacagcagggatgtgcaagctcagaaagcactccaaagacctctgccagttgc
agtcctgctcctgagtctcccatgagctccagcgagtcggtgaagagcctgacggagctg
gtgcagcagccctgccccaacatcgacaccagcaaggagggcaaagcccaggagcccagc
gagccgccgccctccgagtcccaagccagcacccccctgcctctctctggccactcagca
ctcagcattcaggagctggtggccatgtccccggagctggacacctatggcatcaccaag
agggtcaaggaggtgctaacggacaacaacctgggtcagcgtttgttcggggagacaatc
ctagggctgacacaaggctctgtctcagacctcctggctcgccccaagccctggcacaag
ctgagtctgaagggaagagaaccttttgtccgcatgcagctgtggctgaacgacccaaac
aacgtggagaagctgatggacatgaaacggatggagaaaaaagcctacatgaagcggcgg
cacagctcggtcagcgacagccagccctgcgagtcctcctccgccggcatcgactacagc
cagggagccagcccccagccccagcaccagctgaagaagccccgggtggtgctggcacca
gaggagaaggaagctctgaaacgagcctaccagcaaaagccatacccatcaccaaaaacc
atcgaggaactcgccacgcagctcaacctgaaaaccagcaccgtcatcaactggttccac
aactacaggtctcgcatccgtcgggagctcttcatcgaggagatccaagccgggagccag
agccaggccgggtcgagcgactctccgtccgcccggagcagcagggccgctcacagctcc
gagggggacagctgggacggcgtggacgcggaagggccagctgagggcaaggccagcggc
ccggaggcggaggagtacagcaatgcaaccacaaagtctcagggagggtcagcggagtcg
gctttcgaggcgggggaagaggcaccgcaaggcactgccaggtcttcggagaaagcggag
ccgttccaggcggagagcctggaggacaccgacgacgagggcaggctcagagcgccgcgc
cagggctctccgccggcaccgccgcgcccgggagaagctccggagacgctgccaaactct
gccacggaaggggatgcctctacctcagctgcctccacctcagtccttacgggggagagc
tcctacaagccgaaagagagttcagagaaaatctccagtgtgccaagtacgagctcgacg
ccggcctcgggctcgcagaaagccaactccctgcagagcttgttcggcttctcggaggcg
gcgagctccaggaacacgcgagacagctccctgcggaaaaagaaagcggccaacttgaac
aacatcatccaccggctggagaaggcggcgagccgggaggaggccgtcgagtgggagttc
tga

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