Dryobates pubescens (Downy woodpecker): 104306310
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Entry
104306310 CDS
T08526
Symbol
CUX1
Name
(RefSeq) protein CASP
KO
K09313
homeobox protein cut-like
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpub03000
]
104306310 (CUX1)
Transcription factors [BR:
dpub03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
104306310 (CUX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
104306310
NCBI-ProteinID:
XP_009905572
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
DLRKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQR
MHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQK
LQNDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKAD
EIEMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSS
LEVELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKG
QADYEEVKKELNILKSMEFAPSEGSGAQDAAKPLEVLLLEKNRSVQSENATLRITNSDLS
GSARRKGKDQPESQRPATLPASPPSQLLRNAGEQASNTNGTHQFSPTGLSQDFFSSSLAS
PSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSIPSQSPLQQSP
DVNGMAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVS
EILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPK
RRNGAEGNITTRIRTTETGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIR
SILQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKH
SSVTDSSISALQNLSGLKKEPQEAPVLELHGISDSAQGMLRHVKNELGRGGVWKDHWWNT
VQHERRNTALPEDVKVEEASGGKEKVSNQTRPDRSQLQGPSSSEYWKDCPNAESPYSQSS
DLSMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVK
EKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQC
VLPAQGQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTEL
VQQPCPNIDTSKEGKAQEPSEPPPSESQASTPLPLSGHSALSIQELVAMSPELDTYGITK
RVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPN
NVEKLMDMKRMEKKAYMKRRHSSVSDSQPCESSSAGIDYSQGASPQPQHQLKKPRVVLAP
EEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQ
SQAGSSDSPSARSSRAAHSSEGDSWDGVDAEGPAEGKASGPEAEEYSNATTKSQGGSAES
AFEAGEEAPQGTARSSEKAEPFQAESLEDTDDEGRLRAPRQGSPPAPPRPGEAPETLPNS
ATEGDASTSAASTSVLTGESSYKPKESSEKISSVPSTSSTPASGSQKANSLQSLFGFSEA
ASSRNTRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
gacctgcgcaaacaggtagctccattactgaagagtttccagggagagatcgacgcgttg
gggaaacggagcaaagaagccgaggcagccttcttgaatgtttataagagattaattgat
gttccagatcctgttccagccttggatttaggacagcagcttcagctgaaggttcaacgc
atgcacgacatcgaaaccgagaaccagaagcttagggagaccctcgaggagtacaacaag
gaattcgccgaggtgaaaaatcaggaggttacaataaaagcacttaaagagaagatccgc
gagtatgagcagaccctgaagaaccaagcggagaacatagccctggagaaggaacaaaag
ctgcagaatgattttgcagagaaggagaggaagttgcaggagacacagatgtccacagcc
tccaagctggaagaagccgaacacaaggttcaagcgttgcaaacagccttggaaaaaacc
agaacagagctatttgatctgaaaacaaaatacgatgaagaaactactgcaaaggctgat
gaaatcgagatgatcatgacagacctcgaaagagcaaaccagagggcagaggtggctcag
agagaggcagagaccttaagggagcagctctcctcagctaacaaatctctccaactcgct
acgcagatccagaaggctcctgatgtggagcaggccatcgaggtgctcacgcggtccagc
ctggaggtggagctggctgccaaggagagggagatcgcccagctggtagaagatgtccag
agactccagggcagcctcaccaagctgcgggagaactccagcagccagatctcacagctg
gagcagcagctgacagccaagaacagcacactcaaacaactggaagagaaactgaaggga
caggctgattacgaagaggttaagaaagaattgaacatcttgaaatccatggagtttgca
ccctccgaaggctctggtgcgcaggatgcagctaaaccgctggaggtgctgctgctggag
aagaaccgctcggtgcagtcggagaacgccacgctgcgcatcaccaacagtgacctcagc
gggtcagccaggagaaaagggaaagaccagcctgagagtcagcgtcctgcaaccttgccg
gcctcccctccttctcagttgctccgcaacgcgggggagcaggcttccaatactaatggt
acacaccagttctcaccaacgggtttaagtcaagactttttcagctcatccctggcgagc
cccagcttacccctggcctccacaggaaaatttgcactaaactctctcctccagcgacag
ctaatgcagtccttctactccaaggcaatgcaggaagcaggaagcacaagcatgattttt
tcaacaggtccttacagcacaaactccataccttcccaaagtccattacaacaaagcccg
gacgtaaatggcatggccccctcccccagccagtcagaaagtgctgggagcatctctgaa
ggcgaggagatagacacggccgaaattgcccggcaggtgaaagagcagttgatcaagcac
aatattggccagcggatatttggacactatgtgttgggactgtcgcagggctctgtgagc
gagatcctggcccggccaaagccatggaataaactgactgtgagaggcaaggagccattt
cataagatgaagcagttcctctcggacgagcagaacatcttggctcttcgcagcatccag
ggtagacaaagagagaatccaggccagaacctgaacagactatttcaggaagtaccgaaa
cgaagaaatggggctgaaggtaatataaccacaagaatccgaaccacagagactggctct
gatgaagccatcaaatccatcctcgaacaagccaaaagggagctgcaagtacagaaaaca
gctgagccggctcagccgccttctgcatctagcagtggcaattctgatgatgctattcga
tccattctgcaacaagcccgacgggaaatggaggcacagcaggctgcccttgaacctgcc
ttaaaaacaccacccttatctcaagctgacatttctatcctctcccccaaactagtatct
acacctgcaatgtcttcggtttccagctattctcctttggccatatccctgaagaaacat
tcatctgtcactgattccagtatctctgcattgcagaacctctctgggctcaaaaaggag
cctcaggaggcacccgttttagagcttcatggcataagtgattctgcccagggtatgttg
aggcatgttaaaaatgagttgggacgtggtggtgtttggaaggaccattggtggaatact
gtgcagcatgagagaagaaatacagctctgcccgaagatgtaaaagttgaggaagccagt
ggtggaaaagaaaaggtcagcaatcagactaggccagatcgtagccagctccaaggacca
tcttcttcagagtactggaaagattgtccaaacgctgaatctccgtactcccagagttcg
gacttgagcatgactggggcgagtcgcagcgagacgccacagaatagccctctcccttca
tcccctatcgtgtctttgtccaagccatccaaaccttcagttcctccactgacacccgag
cagtatgagatttatatgtaccaggaggtggatacgatagagctaacgcggcaggtcaag
gaaaagctagcaaagaatggcatctgccagaggatctttggggaaaaggtgttggggctg
tcccaaggaagtgtcagtgacatgctctccaggccaaagccatggagcaaattgacccaa
aaaggccgagaaccatttattcgtatgcagctctggttgaatggtgagctgggacagtgt
gtcctgcctgcacaagggcagcaacaaggacaagtccttcactctgtgacatcattacag
gattccctacagcagggatgtgcaagctcagaaagcactccaaagacctctgccagttgc
agtcctgctcctgagtctcccatgagctccagcgagtcggtgaagagcctgacggagctg
gtgcagcagccctgccccaacatcgacaccagcaaggagggcaaagcccaggagcccagc
gagccgccgccctccgagtcccaagccagcacccccctgcctctctctggccactcagca
ctcagcattcaggagctggtggccatgtccccggagctggacacctatggcatcaccaag
agggtcaaggaggtgctaacggacaacaacctgggtcagcgtttgttcggggagacaatc
ctagggctgacacaaggctctgtctcagacctcctggctcgccccaagccctggcacaag
ctgagtctgaagggaagagaaccttttgtccgcatgcagctgtggctgaacgacccaaac
aacgtggagaagctgatggacatgaaacggatggagaaaaaagcctacatgaagcggcgg
cacagctcggtcagcgacagccagccctgcgagtcctcctccgccggcatcgactacagc
cagggagccagcccccagccccagcaccagctgaagaagccccgggtggtgctggcacca
gaggagaaggaagctctgaaacgagcctaccagcaaaagccatacccatcaccaaaaacc
atcgaggaactcgccacgcagctcaacctgaaaaccagcaccgtcatcaactggttccac
aactacaggtctcgcatccgtcgggagctcttcatcgaggagatccaagccgggagccag
agccaggccgggtcgagcgactctccgtccgcccggagcagcagggccgctcacagctcc
gagggggacagctgggacggcgtggacgcggaagggccagctgagggcaaggccagcggc
ccggaggcggaggagtacagcaatgcaaccacaaagtctcagggagggtcagcggagtcg
gctttcgaggcgggggaagaggcaccgcaaggcactgccaggtcttcggagaaagcggag
ccgttccaggcggagagcctggaggacaccgacgacgagggcaggctcagagcgccgcgc
cagggctctccgccggcaccgccgcgcccgggagaagctccggagacgctgccaaactct
gccacggaaggggatgcctctacctcagctgcctccacctcagtccttacgggggagagc
tcctacaagccgaaagagagttcagagaaaatctccagtgtgccaagtacgagctcgacg
ccggcctcgggctcgcagaaagccaactccctgcagagcttgttcggcttctcggaggcg
gcgagctccaggaacacgcgagacagctccctgcggaaaaagaaagcggccaacttgaac
aacatcatccaccggctggagaaggcggcgagccgggaggaggccgtcgagtgggagttc
tga
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integrated database retrieval system