Dryobates pubescens (Downy woodpecker): 104306427
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Entry
104306427 CDS
T08526
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3-like
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub00230
Purine metabolism
dpub00670
One carbon pool by folate
dpub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
104306427
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
104306427
Enzymes [BR:
dpub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
104306427
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
104306427
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
104306427
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Ortholog
Paralog
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
GARS_C
AIRS_C
AIRS
Motif
Other DBs
NCBI-GeneID:
104306427
NCBI-ProteinID:
XP_009905693
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MADRVLVIGSGGREHALAWKLAQSPHVKHVFVAPGNAGTADNGKISNSAVLVSNHTIVTQ
FCKDHNIGLVLVGQEALLEAGIADDLRAAGVRCFGPSAKAAQLASNTSFAKAFLDRHGIP
TARWKAFTNPQEACRFIISTDFPARVVRARGPAARKEVTIAASKEEACRAVQEIMQDRMF
GEMVIIEELLQGEELSCLCFTDGVTVASMPPAQAQKRLLDGDQGPNTGGMGAYCPVPQVP
EVLLEKINNAILQHVVDSMRQEGKAYVGVLQTGLMLTKDGVKILNFKCQFGDPQCQVILP
LLKNDFYEVLQATIDGKLCSFMPAWSENSTAVCVVMASPGYPGNYDKGMEVTGLLQAKEL
GLQVFHAGTTLKDGRVVTSGGRVLSITAVEDDLMKALGEANRGVAAIRFKGATYRKDIGH
RGIQLLRQSLGLVYKERHVEALSSDILFHQLETSIVSNIRSGSHSEVGGFAGFFDLKASG
YDDPILVSQTKGLGPKLQIAQVCKRHDTIGQDLVAICVNDILAQGAEPLFFLSYFACGKL
DTEVTETIKEGIAEACRNAGCAFLGREMTEVSGIYSSGEYDLAGFVVGAVERGQMLLGLQ
RADEEDVLIGLASSGIHGHGFSIIRKILLMSSSHYSSPAPGSCGDKTLGDILLTPAKMYS
PSLLPVLRSGHVKAFAFIADEGLVEGVSRLLPEYVSAVLDALGWKIPEIFCWLYKEGNLS
AEEMAQTFNCGIGAILVVQNDLAQHVLKDIQRCEEAWLIGKVVAPCHTGASRIEVKNLAE
ALQLSSPQHQLNNTAVESQHRHRKSKVKVAVLVSGTGTNLAALINYAKEPGSCAQIVLVI
SNKSGVEELRNAARAGIPTRVIDHKLYGSRSEFDSTIDRVLEEFAVELICLSGFMRILSS
PFLRKWKGKILNASPSLFPPIKDENAHQALQSGFKGTGCTVHFVLEESSPKAVIHQEAVS
VKADDTEETLSERVKEAECRAFPIALQLVASGAVHLGADGKTYWKQECQICSFSYTLFAK
LAAEAKLSSQILIVFWFFSSVKETLLQIKEGA
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccgggtgcttgtgattggcagtggagggagggagcatgctctggcctggaag
ctggcccagtctccacatgtaaaacatgtctttgttgctccgggaaacgcaggaacagct
gacaatggcaaaatctccaactcagctgtattagtgagcaatcacactattgttacccag
ttctgcaaagatcataacattggactggtgttagttggtcaagaagctcttttggaagct
gggattgctgatgacttaagagcagcaggagttaggtgttttggaccatctgcaaaagca
gcccagctggcatccaacaccagttttgccaaagcctttctggatcgacatgggatccca
acagcaagatggaaagccttcaccaatccccaagaagcttgtagatttattatcagcaca
gactttccagcacgagttgttcgggcaaggggccctgctgctagaaaagaagtgacaatt
gcagccagcaaggaggaagcctgcagagctgtccaagagattatgcaggacagaatgttt
ggagagatggtcattatcgaagaacttcttcaaggggaagaactttcttgcttgtgcttc
acggacggtgtcactgttgcctcaatgcctccagcccaggcccagaaacgattgttggat
ggtgaccagggtccaaacactggaggaatgggagcctattgcccagttcctcaggttcca
gaagttcttctagagaaaatcaacaatgctatccttcaacacgttgttgatagtatgaga
caagaagggaaagcatatgtaggtgtgctgcaaacaggtttaatgcttaccaaagatggt
gtgaagattttgaactttaaatgtcagtttggtgaccctcagtgccaggtaattcttcca
cttcttaaaaatgatttttatgaggtgcttcaagcaacaattgatggcaaactttgcagc
ttcatgccagcctggtcagaaaatagtacggctgtgtgtgtggttatggcaagtccagga
tacccaggaaactatgacaaaggcatggaagtaacagggttgctgcaagccaaggagtta
gggctgcaggtgttccatgctggcacaacactgaaggatggcagagtggtgacaagtggt
ggcagagtcctctccattactgctgttgaagatgacctgatgaaagcactgggagaagcc
aacaggggtgtagcagccatacgtttcaagggtgccacttacaggaaggacattggccac
cggggtatacagcttctcagacagtctctgggtctggtatacaaagagagacatgtagaa
gctctaagcagtgacattttgtttcaccagctggaaacatcaattgtaagcaatatcaga
tcaggcagtcattcagaagtaggaggctttgctggtttctttgacttgaaagcatctggt
tatgatgatcctatcttggtatctcaaactaaaggccttggacctaaactgcagattgca
caggtgtgtaaaaggcatgacaccatagggcaggacctggttgccatatgtgtcaatgat
atcctggctcaaggagcagagccgctcttcttcctcagttattttgcttgtggcaaactt
gacactgaagtgactgaaaccatcaaagaaggaatagctgaagcttgcagaaatgcagga
tgtgctttcctgggcagggagatgactgaggtgagtggtatatattcttctggagagtat
gacctggcaggctttgtggttggtgcggtggaaagagggcagatgcttctggggctgcag
agagctgatgaagaggatgtgcttattggactggcctcttctgggattcatggccatggc
tttagcatcataaggaagattctcttaatgtcctcttcacactactcctcaccagcacct
ggcagttgtggtgacaagactctaggagatatattgctgaccccagcaaaaatgtacagt
ccatctttgctgcctgtccttcgctcagggcatgtgaaggcttttgccttcattgccgat
gaggggttggtggaaggcgtctccagacttctgccagaatacgtcagcgctgtcctagat
gctctcggttggaagattcctgaaatcttttgctggctttacaaagaaggaaacctctct
gcagaggagatggctcagacatttaattgtgggatcggtgcaatcttggttgtgcagaat
gacctagctcagcatgttctcaaggacatacagagatgtgaggaagcttggctgattggg
aaagttgttgctccttgtcatacaggagcttctcgcatcgaagtcaagaatcttgcagaa
gctctgcagctgagcagcccccagcatcagctgaataacacagctgttgagagtcaacac
cggcacaggaaaagcaaagttaaagtagctgttcttgtctctggaacaggcacaaacctt
gctgcactcatcaattatgcaaaagagccagggagctgtgctcaaattgtccttgtcatc
tccaacaagtctggtgtagaagaactacgaaacgcagcccgggctggaattcccaccagg
gtgattgatcataagttgtatgggagtcgctctgaattcgacagcaccatcgaccgagtt
cttgaagaatttgctgttgaactaatatgtctgtcaggatttatgagaattctgtccagt
ccttttctcagaaaatggaaagggaaaatcttgaatgcttccccatcacttttcccacca
atcaaggatgaaaatgcccaccaagccttgcaaagtggattcaaaggcacaggctgcact
gtgcattttgtcttggaggaatctagtccaaaagcagtgatccaccaggaggcagtgtct
gtgaaggcagatgacaccgaggagacgctgtcagaacgggttaaagaagcggaatgtcgg
gctttccccatcgccctgcagctggtggccagtggagcagtgcacttaggagctgatggt
aaaacctattggaaacaagagtgccaaatttgcagctttagttacactctttttgcaaag
ctggcagcagaagccaagctgtcatctcagattttgattgtcttctggtttttttcatct
gtaaaggagacgctgctacaaatcaaagagggggcttaa
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