Dryobates pubescens (Downy woodpecker): 104306511
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Entry
104306511 CDS
T08526
Symbol
GAPVD1
Name
(RefSeq) LOW QUALITY PROTEIN: GTPase-activating protein and VPS9 domain-containing protein 1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104306511 (GAPVD1)
Membrane trafficking [BR:
dpub04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104306511 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
104306511
NCBI-ProteinID:
XP_009905782
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLII
TSAGASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPVQQEKLFGEKGT
EKFKQRVQEMVESNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRMKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSSVNLLEGLSRTVVYMTYSQLTSLVGF
MRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
ATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQL
TDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSILLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPTQTDSLLALFDPLSSNEGVSAV
VRPKVHYARPSHPPPDPPILEGAMGGNEARLPNFGSHTLIPTDLEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPGWNRRPGNEERELPMLTTNTGAAVLAASQSSSSSPSKDSSRGEI
EERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPSP
RLSAQAQAAEDILDKYRNAIKRTSPSEGAIVNYDGAEALGDGESMHDSPREEALQNMSAD
DLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEI
VCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLT
RCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAA
DDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDI
LRDQVLHEHIHRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCIL
RMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEES
YWWMQFTAAVEFIKTIDDRK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggacatacacaccctggcccatcacctcaagcaggagcggctctacgta
aactcagaaaagcaacttatccaaaggctcaatgcagatgtgttgaagacggctgagaag
ctgtaccgcacagcatggatttccaagcagcaaaggattaacttggacagactgatcata
acaagtgctggagcttctcctgctgaatgttgccagcatgcaaaaatcttggaggacaca
cagtttgtggatgggtataagcagttgggatttcaggagactgcttatggagaattccta
aacagactgagagaaaaccctaggcttattgcatcctgtctggtggccggagagaagctc
aaccaggacaacactcagagtgtcattcacacagtttttacctccatttatggcaactgc
atcatgcaagaggatgagagctacctcctccaggtcctccgttacttgattgaatttgaa
ctgaaggaaagtgacaacccgaggcggctgctgaggcgaggcacctgtgccttcagcatc
ttattcaaacttttctctgaaggactcttttctgcaaaactttttcttactgcaacttta
catgagccaatcatgcagcttctggttgaagatgaagaccacctggaaacagatccaaac
aagttaattgagaggttctccccagtacagcaggaaaagttatttggagagaaaggcaca
gaaaagttcaagcaaagagtccaagagatggttgagtccaatgaggccaagctggtgacc
ttagtgaacaaattcattggctatctcaaacaaaacacatactgttttcctcacagcttg
agatggattgtgtcacaaatgtacaaaacactctcgtgtgtagacaggctggaggttggg
gaggtcagagcaatgtgcacagatcttcttctagcgtgtttcatctgccctgcaattgtt
aacccagaacagtatgggatcatttctgatgctcctataaatgaggtggcaagatttaat
ctgatgcaggttgggaggcttctgcagcaattggcaatgacaggttccgaagagggagat
ccacgtatgaagagcaaccttgctaaatttgacaaaagctgtgttgctgctttcctggat
gtagttattgatgggcgtgcagttgaaactcctcccatgtcttctgtgaaccttttggaa
ggcttgagtagaacagtggtttacatgacatacagccagctgacttctctggttggcttt
atgcggaatgtaatgtcaagtgatcagcttaaggaagatcgaatggctttggaaaacttg
ctggcaaacttaccccagaacaaaccagggaaaagcagcagccttgaaatgactccatat
aataccccacagctttctcctgcaacgactccagctaacaaaaaaaatcgactgccaata
gcaactcgtagcagaagtagatcaaacattctaatggatcagcatggagatcatgaagga
tcctcccaggagactatcccagaagttcagccagaagaagtgctggtgatttctttgggg
acaggtccacagattactccaggaatgatgtcagaaaatgaggttttaaatatgcagctt
acagatggcggacaaggagatgtccctgtcgatgaaaacaaactccatggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttca
aatcgctccaactctgtgtcatctttagacttagaaggggagagtgtgtcagagcttggc
gcaggcccctctgggagcaacggtgttgaagctctgcagctgttagagcatgaacaagcc
acaactcaggataaccttgatgacaagctccgtaagtttgaaatccgtgacatgatgggg
ctgacagatgacagagatatatcagaaaccgtgagcgaaacttggagtacagatgtctta
ggaagtgactttgatccaaatattgatgaagatcgtctgcaagaaatagcaggtgcagct
gcagagaacatgctaggcagcttgctgtgtttaccaggttcaggatccatcttgcttgat
ccctgcacaggttcaaccatatcagagaccacaagtgaggcatggagtgtggaagtattg
cccagtgattcagaggccccagacttaaaacaggaggaaagactacaagaactggaaagc
tgttcggggttgggtagcacatctgatgacacggatgtgagggaggtcagttctcgaccc
agcacacctggcctcagcgttgtatcaggtattagtgccacatctgaagatattcctaat
aagattgaagatctcaggtctgaatgtagctctgactttgggggaaaagattctgtgaca
agtcctgacatggatgaaacggctcatggagccagtcaattgacatctcctcctactcag
acagattctttgcttgcattatttgatcctctgtcatcaaatgagggtgtatcagctgta
gtaaggcctaaagtacactatgcaagaccctctcatccaccaccagatccaccaatcttg
gaaggagctatgggaggtaatgaggccagattgccaaactttgggtctcacactctaatt
ccaactgatttagaggcattcaagcagaggcattcttacccagagaggctagtccgcagt
aggagttcagatatagtatcgtcagttcggagacccatgagtgatcctgggtggaacaga
cgtcctggaaatgaggagagggagctccctatgctgaccaccaatactggagcagctgtt
ctggctgcatctcaatcatcttcttcatctcccagtaaagactcgtctaggggagagatt
gaagaacgaaaagacagtgatgatgagaagtctgacagaaataagccctggtggaggaaa
cgttttgtgtctgccatgcccaaagctcctattccgtttagaaagaaagaaaaacaagaa
aaagacaaagatgacatggtgcctgacagatatgcaactcttcaagatgatcccagcccc
aggctcagtgcacaggcccaagctgcagaggacattctggacaaatacaggaatgcaatt
aagcgaaccagtcctagtgaaggagccatagtcaactatgatggtgcagaagctctgggg
gatggtgagagtatgcatgactctccacgtgaggaggctttgcaaaacatgtctgcagat
gatctcccagactctgcaagtcaagtagcacagccacaaagttctgctttctcctatagg
gatgcaaagaagaaattgagattggctctttgttcagcagattctgttgccttccccatg
ttgacacattcaacaaggaatggtctaccagaccacacagaccctgaagataatgaaatt
gtgtgcttcttgaaagttcagctagctgaagctattaacctccaagacaagaacttgatg
gcccagcttcaagagacaatgcgctgtgtaagccgctttgataacaggacctgtcgaaag
ctgctggcatctattgcagaggactataggaaaagagctccatatattgcttatttaact
cgatgtcgccaaggcctgcaaacaacacaggctcacttggaaaggctgttgcaaagagtt
ctgcgagataaagaagtggccaacagatacttcactacagtgtgtgtgaggttactgcta
gagagcaaagaaaagaaaataagggagtttattcaagacttccagaaactcacagcagca
gatgataaaacagcgcaagttgaggattttcttcagttcttatatggggctatggctcag
gatgccatatggcagaacgccagtgaagaacagctccaggacgcacagttagcgatagag
cgcagtgtgatgaatcggatcttcaaacttgcgttctaccctaaccaggatggggacatt
ctgcgtgaccaggtccttcatgagcacatacataggttatctaaagtagtgactgcaaac
cacaaagcacttcagatacctgaggtatatctccgggaggcaccgtggccatctgcgcag
tctgaaatccgcacaataagcgcttacaaaaccccccgagacaaagttcagtgtatcctg
cgaatgtgttcaaccatcatgaacctgcttagtctggcaaatgaagattcggtacctggg
gcagatgattttgttcctgttctggtctttgtcctcataaaggcaaatccaccttgcttg
ctgtccactgttcagtacatcagtagtttctatgccaactgtttgtctggagaagagtcg
tactggtggatgcagttcacagcagcagtcgagttcatcaaaactatcgacgaccgcaag
taa
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