Dryobates pubescens (Downy woodpecker): 104306516
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Entry
104306516 CDS
T08526
Symbol
LMX1B
Name
(RefSeq) LIM homeobox transcription factor 1-beta isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpub03000
]
104306516 (LMX1B)
Transcription factors [BR:
dpub03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
104306516 (LMX1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
104306516
NCBI-ProteinID:
XP_009905788
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MDIATGPESLERCFTRGQSDCSKMLDGIKMEDHPLRSGPATLGVLLGELPLASRLCQGCE
RPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKCSGCME
KIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEKEKDLLSSVS
PDDSDSVKSDDEDGDVKPTKGQVAQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFEVS
SKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVMSNR
MEGMMTSYTPLAPPQQQIVAMDQSSYGTDPFQQGLTPPQMPGDHMNPYGNDSIFHDIDSD
TSLTSLSDCFLASSEVNSMQARVGNPIDRLYSMQSSYFAS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgcaacaggtcccgagtccttggaaaggtgctttacgcggggccagtcggac
tgctcaaagatgctggacggtattaaaatggaagaccaccctctgcgctcgggtccggcc
acgttaggagtactgctgggtgagttgccgctcgcttctcggctgtgccaaggctgcgag
cggcccatctcggaccggtttctgatgcgggtgaacgagtcctcctggcatgaggagtgc
ctgcagtgcgcggcgtgtcagcaagccctcaccaccagctgctacttccgggaccgaaag
ctctactgcaagcaggactaccaacagctgtttgctgcaaagtgcagtggctgtatggaa
aagatcgccccaacagaattcgtgatgagagccctggagtgtgtttaccacttaagctgc
ttctgctgctgcgtctgcgaacggcagctgaggaaaggggacgagtttgttcttaaggaa
gggcagctgctctgcaaaagtgactatgaaaaagagaaagacttgttgagctctgtcagc
ccagacgactcagactcagttaaaagtgatgatgaagatggagatgttaagcccaccaaa
ggacaagtagcccaaggaaagggaagtgatgatgggaaggacccaagaagacctaaacga
ccaagaacaatacttactacgcagcagagacgagcattcaaagcatcctttgaagtgtct
tccaagccctgtaggaaggtcagagaaacactagcagctgaaacaggactcagtgtgcga
gttgtccaggtctggtttcaaaaccaaagagcaaagatgaaaaaacttgcacgaaggcat
cagcagcagcaggagcagcaaaattcacagcgactagggcaagaagtaatgtccaaccga
atggaagggatgatgacatcctacacaccacttgcaccaccacagcagcagattgtagca
atggatcaaagcagttatggcacagacccatttcagcagggtcttacccctccacaaatg
ccaggcgaccacatgaacccttatggaaacgactccatttttcatgatatcgacagtgat
acctctttaactagcttgagcgactgttttcttgcctcttccgaagttaactccatgcag
gctagagtaggaaaccccattgacaggctgtactctatgcagagctcctatttcgcctca
tga
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