Dryobates pubescens (Downy woodpecker): 104306577
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Entry
104306577 CDS
T08526
Name
(RefSeq) protocadherin beta-4-like
KO
K16494
protocadherin beta
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dpub04515
]
104306577
Cell adhesion molecules [BR:
dpub04515
]
Cadherins
Protocadherins
104306577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
104306577
NCBI-ProteinID:
XP_009905853
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MQEFGCDHQLAARKARVVSEGNQQLFRLNPSTGVLTAKESLDREEICPQSETCTLFFKVF
FDNPLQLIRGEVEVVDVNDNSPVFPKKEMILEISEMTSPGSHFPLESARDKDVGSNGLQN
YSLESNSHFSLAFGKRKGGGKYPEIVLERQLDREEQREIYLLLIAVDGGLPPRSGTAQIR
IVVLDANDNTPMFSREIYEVSLAENIRTGQLVARVEARDPDEGSNGKVQYAFTQTLEGSQ
QLFDLNPDTGEIRVTGKLDFEDAKKHEMVVKASDGGGLYTTCKVHVEVVDVNDNAPEIQL
TSHTASIPEDAPPRTLVALFSVRDRDAGENGRTECTIEGDVPFTLTPTFGNFYELRTNAA
LDRETTAEYNISIRATDWGPRRLSSRQSLWVQVSDVNDNAPAFSQELYSMWVTENNSPMV
RIGSVQASDADAGSNARVQYALVREEGEEQPAVSVSSESGDVYVVRSLDYERVRALEVWV
SAADGGWPALSARALLRVLVRDENDNAPVVLHPGAESGAGAGELVPRWAPAGYLVAKVVA
VDADAGQNAWLSYELAKATEPGLFRLGLHSGELRTARAVAERDAPRPPRKQAEPLPTFPT
AVAESDAGSLPRSLVYDVCLATGTLSSDFHFLGPLLPCFPAGMPPGAAPQRSSVCSQEAS
NLGEGGHSAAQDLGLTPSQLAARKARVVSEGNQQLFRLNPSTGVLTAKESLDREEICPQS
ETCTLFFKVFFDNPLQLIRGEVEVLDVNDNSPVFPKKEMFLKILETTPPGSRFPLDRAQD
VD
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttcgggtgtgaccaccagctggcagctcgcaaggcgcgcgttgtgtcggag
gggaaccagcagcttttccgtctcaacccgagcaccggagtgctgacggccaaggagtct
ctggaccgagaggagatctgtcctcagagcgagacctgcacactcttctttaaggtgttc
tttgacaacccgttgcagctgatccgaggggaggtggaggttgttgacgtgaatgacaac
tccccagtgtttcctaagaaagagatgattttagagatttccgaaatgacatctccaggg
tcccatttcccactggaaagtgcccgtgacaaggacgtgggtagcaatggcttgcagaat
tacagcctcgagtccaattcgcatttctccctagcttttggaaagaggaagggaggagga
aaatatccagagatcgtcctagagagacagctggacagagaagagcagcgagaaatttat
ttactcctaattgcagtggacggggggttgcctccaaggtcaggcacggctcagatccgg
atcgtagtgctggatgccaacgacaacaccccgatgttcagtagggagatctacgaagta
agcctggcagaaaacatccgcacagggcagctggtggccagagtagaggcaagagatccc
gacgaagggtccaacgggaaagtgcagtacgccttcacacagacattggaggggtctcag
cagctctttgacctaaaccctgacacgggagagattcgagtgacgggaaaactggacttc
gaggatgcgaaaaaacacgagatggtggtgaaagccagcgacggtggagggctgtatact
acttgcaaagtgcacgtggaggtggtggatgtgaacgataatgccccggagatacagcta
acctcacacactgcctccattcctgaggacgcaccaccacgcaccctggtggccctcttc
agcgtgcgggaccgggacgccggcgaaaacggaaggacggagtgcaccatagaaggggac
gtgcctttcactctcacccccaccttcggcaatttctacgagctgagaaccaacgcggcg
ctggacagggagacgacggcagagtataacatcagcatccgagcgacggactggggcccg
cggcgcctgagctctcggcagagcctgtgggtgcaggtgtcggacgtgaacgacaacgcc
cccgccttcagccaggagctctacagcatgtgggtgacggagaacaacagccccatggtg
cgcatcggcagcgtgcaggccagcgacgcggacgcgggcagcaacgcgcgcgtgcagtac
gcgctggtgcgtgaggagggcgaggagcagccggcggtgtcggtgagctcggagagcggc
gacgtgtacgtggtgcgctcgctggactacgagcgggtgcgcgccttggaggtgtgggtg
agcgcggccgacggcggctggccggcgctgagcgcgcgggcgctgctgcgcgtgctggtg
cgcgacgagaacgacaacgcgccggtggtgctgcaccctggtgccgagagcggcgcgggc
gcgggcgagctggtgccgcgctgggcgccggcaggctacctggtggccaaggtggtggcg
gtggacgcggacgcggggcagaacgcctggctgtcctacgagctggccaaggccacggag
ccggggctcttccgcctcgggctgcacagcggcgagctgcgcacggcgcgggccgtggcc
gagcgcgacgcgccccgacccccgcgcaaacaagccgagcccttgcccaccttcccgaca
gctgtcgccgagagcgacgcaggctccctgccccgcagccttgtgtacgacgtgtgcttg
gccaccggcaccctgagcagcgactttcatttcctcggtccgctcttgccctgtttccct
gccgggatgccccccggcgcagcccctcagcggagctcggtgtgctctcaagaggcgtcc
aacctcggagaaggaggccactctgctgcacaggacctggggcttactccgagccagctg
gcagctcgcaaagcgcgcgttgtgtccgaggggaaccagcagcttttccgcctcaacccg
agcaccggagtgctgacggccaaggagtctctggaccgagaggagatctgtcctcagagc
gagacctgcacgctcttctttaaggtgttctttgacaacccgttgcagctgatccgaggg
gaggtggaggttcttgacgtgaacgacaactctcccgtgttccccaagaaggagatgttt
ttaaagattctagaaacgacaccacctgggtcccgtttccctctggatcgcgcccaggac
gttgat
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