Dryobates pubescens (Downy woodpecker): 104306714
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Entry
104306714 CDS
T08526
Symbol
ZC3H13
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104306714 (ZC3H13)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
104306714 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
104306714
NCBI-ProteinID:
XP_009906016
LinkDB
All DBs
Position
Unknown
AA seq
1619 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVEAEPQKRSTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPRKSSKSPKRRSSPKSSSSASKKEKKTSTVS
SPLLDQQRSSKSNPSKKKGPRTPSPPPPVQEETPLGKKHKEKHKAKERSEEKAREVKDRG
RDFERHKEKKEKQRDPSESSHRQKRSPSPADHSGSNSSPSREYSPPAARRRQTSRAPAKS
TTHKRSFSPSRRSASPSGQRHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQRTA
SPPARRSSSPYPPHSSSSPQRKRSPSRHRSPGREKGKHDRDRTSQSHDRRHERRDETRGK
REKERESRDDRDYDQEQSSSRDHRDDRESREGRDRRERETRDRREPRESRDARDSRDTRE
YSRDTKDSRDQRDSRSTRDSHDYRDRESRDAHKKDDQYQDDSRSYGRSHGREESSRAEAR
NDSRSDSRNESRSDRTGRSRGRGPELSDKGSRGTRGSQVDGHSSSGNYHDSWESRSSYPD
RDRYDSREQARDSSFERRHSDRDRRDNRERDQRASSPVRHQGRSDDLERDERREERRVDR
SDDRRDERARERERERERDRERERERERDREREREKERELERDRARERERERERDKDRDR
DRDRDRDHDREREREREREKEREREREEERDRQRDWDDKDKGREDRRDKRDDAREERSSR
DVHEERKSKKRHRNESSPSPRQSPKRRREHSPDSDAYNSGEDKNDKHRLLSQVVRPQESR
SLSPSHATEERQSRWKEEERKSDRKESSRRYEEAEFKERISSADKQRDQTDASESSRSRV
QESIGHRPSEERDASDRMHDDSKKKSKVQKKATKKKKDDDSGVERYANESLTEESQVFSP
KKGQKKKNVEKKRKRSRGDSEVSDEEIVPHHKKKKGPRTPPVTKEELVEAPPEKAVAEVP
PKREDTTFSDWSDEDVPERGDIVVPERTTEDSHRKSHRTRGEKVETPHVTIEDGPHRKPV
DQKRSSSLGSNRSHASSRLRSPSNDSAHRSGDDQTGRRRILHSSSRDRDLEREKKSLEIT
GERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRERLQERDR
HEHDRERERERREGRQRDWDRDVDKDWPRSRERERLREREREREKRRELDRERDRQLPDT
AERERDRTLDISSQKESTKHSEAKLDRDHEKEFDGGCRDSAASEKERTDKDLGPLQSFED
GHEAEKVESLEGGEEEAKVDEVQSLGSGAGEYEPISDDELDEILAGDAEKREDQQEDEKM
PDPVDVIDVDWSSLMPKQPKEPREPGAALLKFTPGAVMLRAGISKRLAGPELFTKIRETC
QRALEKPKDAENLFEHELGALNMAALLRREERAGLLSNLGPCCKALCFRRDSAIRKQLMK
NEKGATKQTYTNSGAMDSDLLRLSLRLFKRKTVCQAPGQEKTEENKIPQPAVQQEVCVS
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagaccatatccgatagtaca
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcagttatagaaggtcaccagaaaga
cccactggagatcttcgggaaagaatgaagaataaacgtcaagacgttgaggcagagcca
cagaaacgaagtacagaggaatcgtcctctcctgttaggaaagagtcttcacgaggaaga
catagagagaaggaagatatcaaaattactaaggagagaacaccagaaagtgaagaggag
aatggggattgggaaacaaatagagaagactctgataacggagatgttaactacgattat
gatcacgagctgtctttggaaatgaagcgccaaaagatccagagagaactcatgaagttg
gaacaggaaaacatggagaaacgagaggaaatagtcattaaaaaggagatttctccagag
gtggttagatctaaattatcaccatcaccaagaaagtctagcaaatcaccaaaaagaaga
tccagtcccaaatcatcatcttcagctagtaagaaagagaagaaaacttctactgtatct
tccccacttctggatcaacagaggagttcgaaaagcaacccgagtaaaaagaaaggtcct
cgtacccctagtcctcctcctccagtgcaagaggaaactcccctggggaaaaaacacaaa
gagaaacataaagcaaaagagcgttcggaagaaaaggcaagggaggtgaaagatagaggg
cgggactttgagaggcacaaggagaaaaaagagaagcaaagggatccctctgaaagctcc
catagacagaagcgttctcccagtcctgcagatcattctggcagtaattcttccccttcc
agggagtattcaccacctgcagcaaggcgaagacaaacctcccgagctccagccaagtca
accacgcacaaacgcagcttctcaccctctcgcaggtctgcttccccatcgggtcagcgt
cactctcctatatcctccaggcatcactcctcttcatcgcagtcaggctcctctgtccaa
agacattctccttccccgcaccgcaaaagaactccttctccgtcctatcaaaggacagct
tccccacctgcgaggagatcttcttctccctatcccccacactcttcctcctcccctcag
aggaagcgaagcccttcgagacacagatctcctgggagagagaagggaaagcacgatcgt
gatcggacttcgcagtctcacgataggcgccacgagaggcgagatgaaacgagagggaaa
agggaaaaggaaagagaatcgcgagacgatcgtgattacgaccaggagcagagttcctcc
agggatcaccgagacgacagagagtcgcgcgaagggagagaccggagagaaagggagacc
agagatcggagggagccacgggaatccagagacgctcgggactcccgagatacgcgggag
tatagcagggatacaaaggatagtcgtgatcagagagactcgcgctccacgcgggattcc
cacgactacagagacagagagagtcgcgatgcccataagaaggatgaccagtatcaggac
gactcgcgcagctatggaagatcccacggcagagaggaaagctctcgggctgaagcgagg
aacgactccagaagtgactccagaaacgagagcagaagcgacagaactggcagaagtcga
ggcagagggcccgaattatctgacaagggaagtaggggaactagaggatctcaggtggat
ggccacagcagtagtggaaactaccatgacagctgggagtcaaggagtagctaccctgat
cgggatcggtatgacagtcgagaacaagcaagggattcctcctttgaaagaaggcatagt
gatcgggacaggcgtgacaatagagaaagagatcagagagcaagctcaccggtgcgacac
cagggacgaagcgatgacctcgagcgggatgaaagaagagaggagcgaagggttgatcgg
tctgatgataggagagatgaaagggcccgggagagagaaagagaaagggagagagaccga
gagagggaaagggaaagggagagagaccgtgaaagagaaagggagaaggaaagagagttg
gagcgggatcgtgctcgggagcgggagagggagagagagcgagacaaagacagggatcga
gaccgcgaccgagacagggaccatgacagagaaagggaacgggagagggagagggagaag
gagcgggaacgagagcgggaggaggaaagggaccgccagagagactgggatgacaaagac
aaaggcagggaagaccgcagggataagagggacgacgcccgagaagaaagaagctcaaga
gatgtccatgaggaaagaaaatccaagaagcgtcacagaaatgaaagcagcccgagtcct
cgtcagtcacccaagcgtcgccgtgagcactcccctgatagtgatgcttacaacagtgga
gaagataaaaatgacaagcataggcttctgagccaggttgtgcgaccacaggaatcccgg
tcactgagcccctctcacgctacagaggagcggcagagtcgctggaaagaagaggagcga
aaatcagacagaaaggagagctcccgacgttatgaagaagcagagttcaaagagaggatt
tcttcagcagataagcagagagaccaaacagatgcttcggaaagttcacgatccagagtt
caggaaagcattggacaccgtccctctgaagaaagagatgcttctgatagaatgcacgat
gacagcaagaagaagtctaaggtgcagaagaaggccacaaagaagaagaaagatgatgac
agtggggtggaaaggtatgctaacgaatcgctgactgaggagagtcaggtcttttcaccc
aagaagggtcagaaaaagaagaacgtagagaagaagcggaagagatccaggggcgattct
gaagtttctgatgaagaaattgttccacatcataaaaagaagaaaggtccaagaacccct
cctgtaacaaaagaggaactggtcgaagcacctcctgagaaagctgtggcagaagtcccc
ccgaaaagagaagatacaacattcagtgactggtcagatgaggatgttcctgaacgcggt
gacattgtcgttccagaaagaaccactgaggattcccataggaagagtcacagaacaagg
ggagagaaagtggaaacccctcacgttactatagaggacggaccgcaccgcaaacctgtg
gatcagaagcgcagcagcagccttggtagcaatcggagccatgcttcgagcagacttaga
tctccttccaatgactcagctcatcgcagtggagatgaccagactgggcggaggaggatc
ctgcacagtagctccagagacagagacttggaaagagagaagaaaagcttggaaatcact
ggggaacggaagtccaggatcgatcagctgaaacgaggggagcccagtcgcagcacatct
tcagatcgtcaagattcgagaagccacagctcaagaagaagctctcctgagtcagaccgc
caggtccactccaggtctggctcctttgatagcagggaaaggcttcaagagcgggatcga
catgagcatgatcgcgaaagagagagagagaggagagagggaaggcagagagactgggac
cgagacgttgacaaagactggccgaggagcagggagcgagagagactccgagaacgagag
agggagagggagaaaagacgggagctggacagagagagagacagacagctgcctgataca
gctgagagagagagagacaggactctggacatttcctctcagaaggaatccacaaaacac
agtgaagcgaaactggacagagatcacgagaaggaatttgatggtggttgtcgggattca
gcggcttcggagaaggaaaggacagacaaagatttaggacctctgcaaagctttgaagat
ggacatgaggccgagaaggtggagagtttagaaggaggagaagaagaagcaaaggttgat
gaggtgcagtccctgggatctggtgctggggaatacgagccaatcagtgacgatgaactg
gatgagattctggcaggtgatgctgaaaaacgtgaggatcaacaggaggatgagaagatg
cctgatcctgtggatgttatagatgtggactggtccagtcttatgccaaagcagccaaaa
gaaccccgagagcctggagctgcgctgttgaaattcaccccgggtgcggttatgctgaga
gctggcatctccaagcgcttggcaggacctgaactcttcaccaaaattagagagacttgc
cagagagctttagaaaagcccaaagatgcagaaaacctctttgagcacgagctgggagcc
ttgaacatggcagcacttctacgaagggaggagagagcaggcctgctcagcaacctgggc
ccctgctgcaaagcgctgtgcttccggagggattctgccattcggaagcagctgatgaag
aacgaaaagggtgcaaccaaacaaacttacaccaactccggcgccatggacagcgacttg
ctacgactgagcctgcggttgttcaaacgaaagactgtgtgccaagctcctgggcaggaa
aagacagaggagaataaaattccccaaccagctgtccagcaggaagtgtgtgtgtcctga
DBGET
integrated database retrieval system
