Dryobates pubescens (Downy woodpecker): 104306745 Help Entry 104306745         CDS       T08526                                  Symbol FDFT1 Name (RefSeq) squalene synthase isoform X1   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism dpub  Dryobates pubescens (Downy woodpecker) Pathway dpub00100   Steroid biosynthesis dpub01100   Metabolic pathways Brite KEGG Orthology (KO) [BR:dpub00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     104306745 (FDFT1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:dpub01006]     104306745 (FDFT1) Enzymes [BR:dpub01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      104306745 (FDFT1) Prenyltransferases [BR:dpub01006]  Terpene biosynthesis   Squalene/phytoene synthase    104306745 (FDFT1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SQS_PSY HAUS4 Motif Other DBs NCBI-GeneID:  104306745 NCBI-ProteinID:  XP_009906049 LinkDB All DBs Position Unknown AA seq 388 aa AA seqDB search MCLQDSLGGGLRTCYRYLNQTSRSFASVIQALDGELRHAVCIFYLVLRALDTIEDDMTIS LDVKVPMLHEFHSYLYQPEWKYTESKEKDRQVLEDFPTISMEFRNLSKVYQDVISDVCHK MGVGMAEFLEKKVDSELEWDRYCHYVAGLVGIGLSRLFSASELEDPIVGQDTELANSMGL FLQKTNIIRDYLEDQLEGREFWPREVWSRYAKKLSDFAQAENIDVAVQCLNELITNALRH VPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAACYNNKQVFRGVVKIRKGQAVTLMMDAT SIQAVKAIMYQYVEEIYQKIPSTDPSSNKTQQIIASIRAMSLPGSPMASRHHYSPIYLSC AMLLAALSWQYLSTISKATEEYVQAGEN NT seq 1167 nt NT seq  +upstreamnt  +downstreamnt atgtgcctgcaggactcgctgggaggaggcctccgaacctgttaccggtacctcaaccag accagccgaagcttcgcctctgtcattcaggccctggacggagagctgcgccatgctgtc tgcatcttctacctggttctccgtgccctggacactatagaggatgacatgaccatcagc ttagatgtgaaggtcccaatgctgcatgagttccactcctatctctatcaaccggagtgg aaatacacagagagcaaggagaaggaccggcaggtgctcgaggacttcccaacgatctcc atggagttcaggaatctgtcaaaggtctatcaggatgtgatctcagatgtttgccacaag atgggcgttgggatggcagagttcttggagaagaaggtggactctgagcttgagtgggac aggtactgccactacgttgctgggctggtgggcatcggcctttcccggctcttctctgcg tcagagctggaagatccaatcgtggggcaggacacagagctggccaactccatgggcctc ttcctgcagaaaaccaacatcatacgtgactacctggaggaccagctggagggaagggag ttctggccccgagaggtctggagcagatatgccaagaagctctcagattttgcccaagca gagaacattgatgtggctgtgcagtgtctgaacgagctcatcaccaatgccctccgccac gtccccgatgtcctcacctacttgtcccgcctgaagaaccaaagtgtcttcaacttctgt gctatcccccaggtgatggctattgccaccctggctgcctgctataacaacaagcaggtg ttcaggggggtcgtgaagatcaggaagggccaagctgtcactctaatgatggatgccaca agcatacaagctgtcaaagccatcatgtaccagtatgtggaagagatctaccagaagatc cccagcacagacccctcatccaacaagacgcagcagatcatcgcctccatccgggccatg agcttgccgggcagccccatggcctcccgccaccactactcccccatctatctgtcctgt gccatgctcttggctgccttaagctggcagtacctcagcaccatctccaaggccaccgag gagtacgtgcaggctggcgagaactga

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