Dryobates pubescens (Downy woodpecker): 104306862
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Entry
104306862 CDS
T08526
Symbol
PAPOLA
Name
(RefSeq) poly(A) polymerase alpha
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104306862 (PAPOLA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104306862 (PAPOLA)
Enzymes [BR:
dpub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104306862 (PAPOLA)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
104306862 (PAPOLA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
RMD6
DUF4269
Motif
Other DBs
NCBI-GeneID:
104306862
NCBI-ProteinID:
XP_009906175
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MPFPVTTQGSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRR
ILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPED
LDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PAPKENPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDM
KIAARHVKRKQLHQLLPNHVLQKKKKHSTEGIRLTALNDSSLDLSMDSDNSTSVPSPTSA
MKTSPLNSSGSSQGRSSPAPAVTASSVTNIQASEVTVPQINSSESSGGTSNESIPQTATQ
PAISPPPKPTISRVVSPVYLLNPSPRTSGNVATKMPSPVIAVKRTSSPHKEDSPKKMKIE
EXXXXXXXSCTDLNEHEKMETKEQPETEANVNSQTETPQTTSLQAPQKTPSTDLSDIPAL
PANPIPVIKNSIKLRLNR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttcccgttacaacccagggatcacaaacgcagcaactacagaagcattatggc
attacctcacctatcagtttagctgcccccaaggagtttgactgcatgcttacccagaaa
ttaattgaaaccctaaaaccttacggtgtatttgaagaggaagaagaactgcaacgcagg
attctaattttgggcaagttaaataacttggtgaaggaatggatacgggaaatcagcgaa
agcaagaatcttccacagtctgtaatagaaaatgttggtggaaaaatttttacatttgga
tcctatagattaggggttcatacaaaaggtgctgatattgatgccctgtgtgttgcacca
aggcatgttgaaagaagtgattttttcacgtcattttatgaaaaactgaaacagcaagag
gaagtcaaagacctgagggctgttgaagaggcttttgtcccagttattaaactttgtttt
gatggaatagagattgatattttgtttgcaagattagcactgcaaactattcctgaggac
ttagacctacgagatgatagcctactcaaaaatttagacattagatgcatacgaagtctt
aatggttgccgggtaaccgatgaaattctgcatctagtaccaaacattgacaacttcagg
ttaacactgagagctatcaaactgtgggcaaaacgccacaacatctattccaatatacta
ggtttccttggtggtgtttcctgggctatgctagtagcaagaacctgccagctttatcca
aatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaatgg
ccaaatccagtgctattgaaacagccagaagaatgcaatcttaatttgcctgtatgggac
ccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcataccca
cagcagaactctacctacaatgtgtccgtttccacacggatggtcatggttgaggaattt
aaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaactt
tttgaagctccaaacttctttcaaaagtacaagcattatattgtacttctagcaagtgca
ccgactgaaaaacagcgactagaatgggtgggcttggtggaatcaaaaatccgtattcta
gttggaaacctggagaagaatgaattcattacactggctcatgtgaatccacagtcattc
ccagcacccaaggagaatcctgacaaggaagaataccgtacaatgtgggtgattgggttg
gtgtttaagaaaactgaaaattctgaaaacttaagtgttgatcttacctatgatattcag
tcatttacagacacagtttataggcaagcaataaacagcaagatgtttgagatggatatg
aagattgctgcaaggcatgtgaaacgtaagcaacttcaccaactcctacctaatcacgtg
cttcagaaaaagaaaaagcattcgacagaagggatcaggttgactgctctgaatgacagc
agcctagatttgtctatggacagtgataacagcacgtctgtgccttcgcctactagtgct
atgaagacgagtccattgaacagttccggaagttctcagggcagaagcagtcctgcgcca
gctgtaacagcatcatctgtgaccaacatacaggcttctgaagtcactgtgccacaaata
aattccagtgaaagctcagggggtacttcaaatgaaagcattcctcaaactgccacacaa
ccagccatttctccaccaccaaagcctaccatctctagagttgtttccccagtgtatcta
ttaaatccatcaccgagaacttcaggaaatgttgcaacaaaaatgcctagccctgtcata
gcagtgaaaaggacatcttctccccataaagaagattctcccaagaaaatgaaaattgaa
gagnnnnnnnnnnnnnnnnnnntgagctgtacagatttgaatgagcatgaaaaaatggaa
actaaggagcaacctgagacagaagcgaatgttaattctcaaacagaaactcctcagaca
acttctctgcaagctcctcagaaaacacccagtacagacctttcagatattcctgctctc
cctgcaaatcctattcctgttatcaagaattcaataaaattgagattgaaccggtaa
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