Dryobates pubescens (Downy woodpecker): 104306865
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Entry
104306865 CDS
T08526
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
dpub
Dryobates pubescens (Downy woodpecker)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
104306865
NCBI-ProteinID:
XP_009906181
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MAVLLFPVQLLTVAVTIYLELVRSAQGGAYYGIKQLPPQVPQYQPLGQQVPHMPLGKEGI
PMQHMGKEVPHMQYGKEYPHLPQYMKEVPQMPLLGKDMAPKKEKEIPMRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGVMGPPGPRGEMGPKG
EIGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGLKGPPGAPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPIGLPGVGKPGMVGFPGPQGPLGKPGPPGELGLQGPPGAPG
IQGPPGLPGVGKPGQDGVPGQPGFPGGKGEQGLPGPPGPPGMPGVGKPGFPGPKGERGMG
GLPGPLGPKGEKGHAGPPGMGGPPGEPGQPGLPGIMGPPGAAGFPGPKGEGGAVGPPGPV
GPKGEPGLQGFPGKPGFPGEVGAPGLRGLPGPTGPKGEAGHKGLPGLPGVPGLMGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGPPGLPGAKGEPGLPGPPGFPGMGKPGAAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVIIPPTPPAVGQYLPEAGPGVEGLKPPYGYKGKK
GKAGGVVYEMPAFTAELLTPFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGIYYFAY
HVHCKGASVWVALFKNNEPLMYTYDEYKKGFLDQASGSAVVQLMHGDKVYVQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgctcttccctgtgcagctgctgacagtggctgtcaccatttacctagag
ctggtgaggtctgctcaaggtggtgcctactatgggatcaagcagctgccaccccaggtg
ccccagtaccaacctcttggacaacaagtacctcacatgccactgggcaaagaaggcatt
ccaatgcagcacatgggcaaggaggtgccccatatgcagtacgggaaagaatacccccat
ctgcctcagtacatgaaggaggtcccacagatgcctctgcttggcaaggacatggctccc
aagaaagagaaagaaatacccatgcgcagtctgaggggtgagcaaggtccccctggcgag
cctggaccaagagggccgccagggccaccaggattaccaggtcacggtgtgccaggagcc
aaaggaaaaccagggccacaaggatacccaggaattgggaagccgggtctgcctgggatg
ccagggaaaccgggggtcatggggcccccagggccgagaggggagatggggccaaagggg
gagattgggcccatgggaatacccgggccacaaggaccaccagggcctcacgggcttccc
ggcatagggaaagcaggtgcaccggggctgcagggacaaccagggccaaagggtgagcct
ggcctgaagggccccccgggagcccctgggatcccagggccaaaaggggagaagggcgtc
gggatcccaggtttaccggggctgaagggtccacccgggctgcctggcccccctggtccc
atagggctgccaggggttggcaagccaggcatggttggcttccctggcccacagggaccc
ctgggcaaacctggccccccaggagagctagggttgcaggggcccccaggggctcctggg
atccaaggccctcccggcctgcctggagtgggcaaacctggccaggatggggtccctggc
cagccgggcttcccagggggcaaaggggagcaaggcctcccaggcccaccggggcccccc
ggcatgcccggagtcgggaagccaggcttccccggacccaaaggcgagcgtggcatggga
ggcttgccagggcccttaggaccaaagggggagaaggggcatgcaggcccacctggcatg
ggggggccgccaggggagccaggccagccgggactgccaggcatcatgggccccccaggg
gccgctggcttcccaggacctaaaggagagggtggtgccgtggggccaccaggaccagtg
ggccccaagggcgaacccggcctgcaggggttcccagggaagccaggctttcctggggaa
gtgggggcccctgggctgcgggggctgccaggccccacaggacccaaaggagaagccggc
cacaaaggcttgcctgggctgccaggtgtcccagggctcatggggcccaaaggtgagcca
gggctccctggtgcccaggggcttcagggcccctcaggcatccccggcatagcagggccc
agtggtcccattgggcccccggggctgccaggggcaaagggagagcctggcctacctgga
ccccctggcttccctggcatgggcaaacctggtgctgcagggctgcagggccccccaggg
aagcctggtgcacttggtccccccggccagccaggccttcaggggccacccggaccccct
gggcctccaggtcccccagtcatcatcccaccgactccaccagctgtaggacagtacctg
cctgaggcagggccgggtgtagaaggcctcaagcccccctatggctacaagggcaagaaa
ggcaaggctggtggtgtcgtctatgagatgcctgcattcacagccgagctcctcactcct
tttccccgggttggggttcctgtgaagtttgacaagctcctctacaatggccggcagaac
tacaacccccagacagggatcttcacctgcgagatccctggtatctactacttcgcctac
cacgtccactgtaaaggggccagtgtctgggtggcgttgttcaagaacaacgagcccttg
atgtacacctacgatgagtacaagaagggcttccttgaccaggcttcgggcagcgctgtc
gtccagctgatgcacggagacaaggtttacgttcagatgccatccgagcaggcggcagga
ctctatgccgggcagtacgttcattcatctttttcaggatatttattgtatcccatgtaa
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