Dryobates pubescens (Downy woodpecker): 104306921 Help Entry 104306921         CDS       T08526                                  Symbol PALB2 Name (RefSeq) partner and localizer of BRCA2   KO K10897   partner and localizer of BRCA2 Organism dpub  Dryobates pubescens (Downy woodpecker) Pathway dpub03440   Homologous recombination dpub03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:dpub00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     104306921 (PALB2)    03460 Fanconi anemia pathway     104306921 (PALB2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dpub03400]     104306921 (PALB2) DNA repair and recombination proteins [BR:dpub03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA complex      104306921 (PALB2)    FA (Fanconi anemia) pathway     Downstream FA components      104306921 (PALB2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PALB2_WD40 Motif Other DBs NCBI-GeneID:  104306921 NCBI-ProteinID:  XP_009906237 LinkDB All DBs Position Unknown AA seq 1275 aa AA seqDB search MFLLDRTLLGVLGTCDIFPTGSRDKVSPRADKHATSQLQTKACSDPDTEKQTSVTSKGVP DCCSDEAEVKLQASSEPSQQSLCWGVVRPTPEEKKPQSSSSLLKLRRRPKAVVLEGREAA PRVDCTGTDETLRDPMARTEELQSLVFRQSSLLKAEENADSASRAALKQSEGCSSTPPEA ALGITQDVTDDIDLGVPELFLSAPRDVWQPESPSAVPTSDHCEPCSQSRDSVSLDTKEDR GKESFSVINQTDGESVCEDQGELQGLLDLMSENEVLPSDGDSTMTNESTSHQGNQRGAES LNPFPADLSAGTAGELPENRQPEVQPKLSCPDKVAAESTLNSCTVVEGLLFPVEYYVRTT RRMSSCQRKPDLEAVILSQLGRSKKGQRSKGKQKDASSDLPSQERAENNVETPFPFCAAE KEPANPGSPPRSPPVSSGSSASLASAAPSGGSSAKPDRRPSQRRQKGSRRPACSPPVQQL SQELLESLKLPAPGECSSLLSNEGQREKENWEANPEKPSSDERRPSAAGALGAGEAGGTC ATQLAGSDPPGASQGLGKCRTLSEQLQNPLQSRDSLKPGNETFPNHIGDLEANAAVCQAG EQPMEHVRNHHMEGACGAEQPLLMPVPPRRSLRSSTRQRANQASKDVSKRGLSSPAGSEG PASLGLPALDSSTCSSPFSFRSPQWLASKLGIRDFHLPDEEFGQLKLEKLESSPLNELEG FVPSVAGDSVASQDRQDAPMNPELNTLTSNLVSPLKHELPRLPPTESPTSRKELSTHGLL FTPMGTVLPGAPTQPETQISSSIFPVLGASPAVLPSVQGELFPTAPSAPPLLVSPSSSRG ASVQVVGDGECKDSTILLPLDSCVVGSAGKEEEQGTRFPSEGGRGPDDKPGEAVALEKDQ LSEGEEQSSCRASPGQRTDEAEQLAAELHHGPAEENLQLVSKLKDSSSSCAVDVSTTWWE AAGCRELCVVTACESCVSLWKPLASDCWGKVHTWQLGEVSVIQIVPLPDTCNLVCVALGE LEIGEIRLLLYSAENDSFKQSVVKSGTIKAVLGLKDRRLVSSSRTMQEQQVEIVSLTETG RSTDGQTLMPPEETVLAFAEVEGMREALVGTTAVNSIVVWNLKTGQLLRKMHVGYSYPAS ICHRAYSDSGLLFVVVSHPHAKESEACGNPAFHLLAFNPTTARSRGVMASSLPRGHRGRY LEGDVKDALAAAVLTSGAIMVWDLLLGQCTALLPPGPAGNWALARWAAAGACLLAGQQDG PVCHACGLCSRVCHA NT seq 3828 nt NT seq  +upstreamnt  +downstreamnt atgtttctcttggacaggactttgctgggagtacttggcacatgtgacatttttcccaca ggttctagagataaggtatctcctcgtgctgacaagcatgcaacctctcagttacagact aaagcctgctctgatcctgacacagagaagcaaacatccgtgacgtctaaaggtgttcct gactgctgcagtgatgaggctgaggttaagctgcaggctagctcagagcccagccagcaa agcctctgctggggagttgtgaggcctacccctgaggagaaaaaaccccaaagctccagc agcttgctgaagctgaggagacggccaaaggctgtggtattggagggaagggaagcagca cctcgtgtggattgcactggcactgatgaaacgctgagagatccaatggccaggacagag gagcttcagtcacttgtcttcaggcaaagcagcctcctgaaggctgaggagaacgctgac agtgcttccagagcagcccttaagcagagcgaaggatgcagctccacacctcctgaggcg gcgctgggcattacccaagatgtgactgatgatattgacctaggagtgcctgagctgttc ctgtctgcaccaagggatgtctggcagcctgagtcccccagtgctgtgcccacatctgat cactgtgagccgtgttcgcagagcagggactctgtttcgctcgacaccaaggaggacaga ggaaaagaatccttcagtgtaataaaccaaacagatggtgagagtgtgtgtgaggatcag ggagagctgcaggggctcttggatttgatgtcagaaaatgaagtgctgccttctgatgga gatagcaccatgaccaatgagagcacaagccaccaaggaaatcagaggggcgctgagagc ttaaatccctttcctgcagatctttctgcgggcactgctggagagctgccggagaatcga cagcctgaagttcagcccaagctttcttgcccagacaaggtggcagctgaaagcacactg aactcctgcactgtggttgagggactcctgtttccagtggagtactacgtcaggactacg cgccgcatgtccagctgccagaggaaaccggacctggaggctgtgatcctcagccagctg ggcagaagtaagaaaggacagagaagtaaaggcaagcagaaagatgcgagttcagatctc ccctctcaggaaagagctgaaaacaacgtggagacaccattccctttttgtgcagcagaa aaggagccagcaaacccaggcagtcctcccaggtcgcctcctgtgtccagcggcagcagc gcttccctggcatcagctgctccgagcggcggcagcagcgccaagccagaccggagacca tcgcagcggaggcagaagggcagcagaaggcctgcctgcagcccccctgtgcagcagctg tcacaggagcttctggagagtttgaagctcccggcaccgggggaatgcagcagtctgctg tcaaatgagggtcagagggagaaggaaaactgggaagctaaccctgagaaaccatcctca gacgagagaaggccatctgctgctggagctcttggggctggagaggcaggagggacctgt gctacacagctggcgggttctgatcctcctggggcaagccaagggcttggcaaatgtagg actctgtcagaacagctccaaaatccccttcagagcagagattctctgaagccagggaat gaaacttttcccaaccacatcggagatctggaagccaatgcagctgtgtgtcaggctggt gaacagcccatggagcatgttaggaatcaccatatggaaggagcctgtggggctgagcag ccactactgatgcctgtccctccacgccgctctctacgttcctccacaaggcagagagcc aaccaagcctccaaagatgtcagcaaaagaggactaagctctccagcaggttcagagggt cctgcttcccttggcctccctgctctggactccagtacctgcagctctcccttctccttc cgcagtccccagtggctggcctccaagctgggtatcagagacttccacttgccagatgag gagtttggacaactaaaacttgagaaattagaatcttcccccttgaatgagttggagggt tttgttcctagtgtggctggggatagtgtggcttcacaggacaggcaagatgcaccaatg aatccagaactgaacactctcacaagtaatctggtttcacctctcaaacatgaattgccc aggttacctcctacagaaagcccaacttccaggaaggagctttccacccatggactgctg tttactcccatggggactgtcttgcctggtgctcccacccagcctgagactcagatctcc tcatccattttccctgtcctgggggcatccccagctgtcctaccatcagtgcagggtgag ctcttccccactgccccttctgcaccccccttgctggtgagccccagttcctccagagga gcatctgtccaggttgtgggtgatggggagtgcaaagactccaccatcctgctgcccttg gacagctgtgttgtgggatctgctggaaaagaggaggaacaaggtacaaggtttccttca gaaggtggaagaggtcctgatgataaacctggtgaggctgtggccttggagaaagatcag ctgtcagagggtgaagagcagagctcctgcagagcgtctcctgggcagagaacagatgaa gcagaacagctggctgcagagctgcatcatggcccagcagaggagaacctgcagcttgta tccaagctaaaggattcttccagttcctgtgccgtggatgtgagcaccacgtggtgggaa gcagctggctgcagggagctgtgtgtggtgactgcttgtgagagttgtgtctccctgtgg aagcctctggcctctgactgctggggaaaggtccacacctggcagcttggagaggtctct gtaatccagattgttcctctgccagacacctgtaatctcgtgtgtgtagcactgggagag ctggagattggagaaataaggctcttgctttactctgctgagaatgactcattcaagcaa tcagtagttaaatctgggaccataaaagctgttctcgggctgaaggacaggaggctggtc agcagcagcaggaccatgcaagagcagcaagtggaaatagtgtcacttacagagacaggg aggagcacagatggacagaccctgatgccccctgaagaaactgttctggcttttgctgaa gtggaagggatgagagaggccctggttggcaccactgcagtgaacagcatcgttgtttgg aatctgaagacaggccagctcctgaggaagatgcacgttggttattcctacccggcttcc atctgccatcgagcgtattccgactctggccttctgtttgttgttgtaagtcacccccat gccaaagagagcgaggcctgtggaaaccctgccttccacctgctggccttcaaccccacc acagccaggagcaggggggtgatggcctcctccctcccacggggccacaggggaaggtac ctggagggggacgtgaaggacgctttggctgcagccgtgctgacctcgggtgccatcatg gtctgggacctgctgctggggcagtgcacggccctgctgcccccaggcccagcaggcaac tgggcactggcccgctgggccgctgctggtgcctgcctgctggctgggcagcaggatggt cctgtctgccatgcctgtgggctctgctccagagtatgccatgcctaa

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