Dryobates pubescens (Downy woodpecker): 104306979
Help
Entry
104306979 CDS
T08526
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04621
NOD-like receptor signaling pathway
dpub05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104306979 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104306979 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dpub04054
]
104306979 (NOD1)
Pattern recognition receptors [BR:
dpub04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104306979 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
NOD2_WH
LRR_4
SpoU_sub_bind
AAA_16
AAA_22
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
104306979
NCBI-ProteinID:
XP_009906304
UniProt:
A0A093J692
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MEGHLCANLEKPPGASPPSFIALLKVHREILVSTIRNTQCLIDNLLKNDYFSTEDAEIVV
QFPTQADKVRKILDLVQSKGEEVSEYFILVLQKVTDAYYELQPWLDKIGYEPSEYICRKP
VVNTDPVSRYCQKLRDELGRDSKFVMSYGQREEMLLEDIYAPSIMELVSFTNESLGQVCQ
LEALFDDAVGLINEDGETIYVFGDAGIGKSILLQRIQSLWARKELDIGAKFFFRFRCRMF
SCFKEDEAICLQDLLFKYNCYPDQEPMEVFHHILQFPHTVLFTFDGFDEIYSSFDLSSVP
EVCSPDEPIHPLALLVSLLRGKLLKGSKKILTARTGTELQRNIIRKKVLLRGFSCSNLKD
YTAMFFRDERLRALVLDQLEGNSNLCSLCSVPLFCWIIFKSYEQFHSMFDSQELPDCSVT
LTDVFLLMIEVHLNRSLKTSLLRNNTRSRAEVFKLRKETLLTLGKLAYKGMENSFFIFKQ
EEVSIANITEEDLQLGFLRTVKGYSGCDDQATYEFLHLTLQSFFTAFFLVVEEKVSAKEL
LQFFSTEAAQLTCLRIPWLKKQRAERDPFQNNEHFHFTNLFLCGLLSRAKQKLLRHLTLP
GVIKRKRKMLVTYFGESTKSHLMSYTRSNLPTYNQIQVQPNFVWVLRCLYEMQSQKVGRL
AARHMQANYIKLTYCGACAADCRAIAFLLHHFPKRLALDLDNNNINDYGVKQLLPCFSKL
AVIRLSVNQVTDHGVRILCEELSKYQIVTFLGLYNNQITDVGAKYVAKLIEECSSLEYVK
IGANKITSEGGKCLAQAIQKSKTIFEIGMWGNQVGDEGAKAFAEALRNHPRLTNVSLALN
GITTEGGKSIAEALQHNNSVKIFWLTKNELDDEAAMSFAEMLKVNKKLVHLWLIQNQITA
KGVKHLSEALKENTTIKEICLNGNRLSPEEAKAFESEERIICF
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccacctttgtgctaacttggaaaagcccccaggagcaagtcctccatccttc
attgctttgctgaaggtacaccgagaaattctggtcagcacaatccgaaacacgcagtgt
ctgattgacaacttgctgaagaatgactacttctccactgaagatgcagagattgttgtc
caatttccaactcaagcagataaggttcgcaaaattctggacttggttcaaagcaaggga
gaagaagtttcagaatatttcatccttgtcctgcagaaagtcactgatgcttactatgaa
cttcagccttggctggataaaataggttatgagccttcagagtatatctgtaggaaacct
gtggtaaacacagatccagtcagcaggtattgccagaagctcagagatgagctgggccgg
gactccaagtttgtgatgtcctatggccagagggaagagatgctgctggaagatatctat
gctcccagtatcatggagctggtcagtttcaccaatgagagcctaggccaagtatgtcaa
ttagaagccctttttgatgatgcagttgggctaattaatgaagatggagaaacgatttac
gtctttggtgacgcaggaattggaaaatccatcttgctgcaaaggatccaaagcctttgg
gccaggaaagaactggatataggggccaagtttttcttccgtttccgctgtagaatgttt
agttgctttaaggaagatgaagccatatgcttgcaagacctgctcttcaaatataattgc
tacccagaccaggagcccatggaggtgttccatcacatcttgcaattccctcacactgtt
cttttcacgtttgatggcttcgatgagatctattccagctttgacctcagcagtgtgccc
gaggtgtgttcacccgacgaacccatccaccctctggcactgctggtaagccttctcaga
ggaaagcttctgaagggatccaagaagattcttacagctaggacaggaactgagctccaa
agaaacatcattaggaagaaagtgttgctgcgtggtttctcctgcagtaacctgaaggat
tacactgctatgttcttcagagatgagaggctgcgagcgctggtattggaccagttggaa
ggtaactccaatctctgcagtttgtgctcagtgcctttattttgttggattatctttaaa
agctatgaacagttccattccatgtttgacagccaggagcttccagactgttctgttaca
ttaacagatgtatttctgctcatgattgaagtccatctgaaccgatctctgaaaacgagc
ttgctgaggaacaacaccaggagccgagcagaggtgttcaaactgagaaaggaaactctt
ctgactttgggcaagttggcatacaaggggatggagaactctttctttatcttcaagcag
gaggaggtctcaatagcaaacatcaccgaggaagacttgcagttgggctttctcaggaca
gttaaaggttacagtggctgtgatgatcaggccacttacgagttcttgcacttgaccctc
cagtcctttttcacagctttcttcctggttgttgaagagaaggtgagtgccaaggagctg
ctgcagttcttcagcactgaggctgcccagttgacttgcctccgtattccctggctgaag
aagcagcgggcagagagggatcctttccagaataacgagcacttccatttcaccaacctg
tttctctgcggcctgctgtccagagccaaacagaagctcctcagacatttaacgttgcct
ggggtcatcaaaaggaagaggaagatgctggtcacctactttggggagagcacaaaatcc
cacctgatgagctacactcgctccaacctcccaacctacaaccagatccaggtgcagccc
aactttgtgtgggtgctgcggtgcctgtacgagatgcagagccagaaggtggggaggctg
gcggcccggcacatgcaggccaactacatcaagctgacctactgcggtgcctgcgccgcc
gactgccgcgccatcgccttcctgctgcaccacttccccaagcgtctggcgctagacctg
gacaacaacaacatcaatgactatggagtcaagcagctgctgccctgcttcagcaagcta
gcagtcatcaggctcagtgtaaatcaggttacagatcatggagtaaggatcttgtgtgaa
gaactctccaagtaccaaattgtgactttcttgggcttatacaacaatcaaatcactgat
gttggagccaaatatgttgcaaaactcattgaagagtgttcaagccttgaatatgttaag
ataggggcaaacaagataaccagcgaaggagggaagtgccttgcccaggccatccagaag
agcaagacaatctttgaaattgggatgtggggtaatcaagttggagatgaaggagcaaag
gcatttgcagaggccctgaggaaccaccccaggttaacaaatgtgagtcttgcactcaat
ggcatcaccacagagggaggcaaaagcattgctgaagctctgcaacacaacaattcagtg
aaaatattctggctgactaaaaatgagctggatgatgaggcagcaatgagttttgcagag
atgctgaaggtcaacaagaaactggtgcatttatggcttatccagaatcagattacagcc
aaaggggtgaagcacctcagtgaagcactcaaggagaacacaactattaaagaaatctgt
ctgaacgggaaccggctcagcccggaggaggccaaagcttttgaaagtgaagagcggatc
atctgcttttga
DBGET
integrated database retrieval system
