KEGG   Dryobates pubescens (Downy woodpecker): 104307014
Entry
104307014         CDS       T08526                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104307014 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpub03019]
    104307014 (NDC1)
Messenger RNA biogenesis [BR:dpub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104307014 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 104307014
NCBI-ProteinID: XP_009906340
LinkDB
Position
Unknown
AA seq 601 aa
MSVVVLVISIFNAEFYAVVPSIPCSRLALIGKIIHPHQVIHSIVHAAMGILVAWCAAVMT
KGRFQFLTVPCTPSDSLDDDVPQMCLNEYHFFFLLSGAFMGYSYSLFYFINNMNYLPFPI
IQQYKYLRFRRSLPLLVKHSCVESLYFVRNFCVTYYFFGYIPKAWISTAMDLHPDSKLHP
LDTLTGLLDLSLFYHAWLCGIFLLITWHIAWLLFKIYATETHHFPVQPTFAEETDQCLPK
ILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAISRECLSLLSDLT
QRLIAQQEAAAANGRAKQPAGELKVSPQTPGALVPELMSLQSQRSHVVLRASMSSLVKSP
LMPLKTSPGSNVGSPFSSPALNSKMGTLDVNSSWHGSGQSPHVVRRGPKLWTSGSDLQMN
GSHHESSPVLSAPRAGSEAVQPRFIYTWLQNKQEQIKNFLSRRVLIMYFFSKHTEASIQA
VFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQEVVDRHFKLPHVSS
KPPRVSGSLVDTSYKTLRFALRAALKTALYRITTVFGEHLNAVQVSAEHKKRLQQFLEYK
E
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgtctgtggtggtactggtaataagcatcttcaatgctgaattttatgcagttgtgcca
tccataccctgctctcgactggcactgattgggaagattattcaccctcatcaagtcatc
cattcgatcgttcacgctgcaatggggatcttggttgcatggtgtgctgcagtgatgaca
aaaggaaggttccagtttctcactgtgccctgcacgccttcagacagcctagatgatgat
gtccctcagatgtgcctaaatgaatatcacttcttctttctcctttctggagccttcatg
ggatacagttacagccttttctattttattaacaatatgaattatttgccatttccaatc
atacagcaatacaagtacttgcgtttcagaagatctttgcctctgctggttaaacacagt
tgtgtggaatccctctattttgtgaggaacttctgtgtcacatactacttctttggttac
atcccaaaggcatggataagtaccgcaatggatcttcatccagacagcaaattacatcct
cttgacactctgactggattgttggatctctccttgttttaccatgcctggttgtgtggc
atcttccttctgattacctggcacattgcctggttgctcttcaaaatctatgctacggag
acacatcattttcctgtccagccaacttttgctgaggaaacagaccagtgcctgcctaag
atcctgaacagcaaccctcctctcattataaagtttttagccttacaagacctgatgtta
ctttcccagtactctcctgttcgacggcaggaagtctttagccttagtcagccaggtggg
cacccacacaactggactgcaatatcaagggagtgcttgagtcttctgagtgatctgacc
cagaggctgatcgcacagcaggaagctgctgcagcaaatggcagagcaaagcagccagca
ggagagctgaaagtatctccacagactccaggggcccttgtgccagaactcatgtccttg
cagtcccagagatcccatgttgttctcagagcttccatgtcttcgctggttaaatcaccc
ctgatgcccttaaagacatcgcctggctctaacgttggttcacctttcagctcacctgct
ttaaactccaagatgggaactctggatgtaaattcttcttggcatggctcaggccaaagc
cctcatgttgtgagaaggggaccaaagctttggacatcaggttcagatctgcaaatgaat
ggttcccaccacgaatccagcccagtgctctctgctccaagagctggaagtgaggcggta
cagccaagatttatttacacatggctgcagaacaagcaagagcagatcaagaacttcctg
tccagacgagtgctgataatgtatttcttcagcaagcacacagaagcctccatccaagcc
gtcttctctgatgcccaaatgcacatctgggctttggaaggtctgtctcatttggtagca
gcctcctttactgaagaccagtttggagttgtccaaactacactgccagctatcctgaat
actttactgactcttcaggaggttgtagacagacatttcaaactgcctcatgtttctagc
aagccccccagggtttcaggcagcctggtggacacgtcctacaaaacgctacggtttgcg
ctccgagcagctctgaaaacagccctgtacaggatcaccactgtgtttggagagcacctg
aatgcagtgcaagtgtctgcagaacacaagaaaagacttcagcaattcttggagtacaaa
gaataa

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