Dryobates pubescens (Downy woodpecker): 104307014
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Entry
104307014 CDS
T08526
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104307014 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104307014 (NDC1)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104307014 (NDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
104307014
NCBI-ProteinID:
XP_009906340
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MSVVVLVISIFNAEFYAVVPSIPCSRLALIGKIIHPHQVIHSIVHAAMGILVAWCAAVMT
KGRFQFLTVPCTPSDSLDDDVPQMCLNEYHFFFLLSGAFMGYSYSLFYFINNMNYLPFPI
IQQYKYLRFRRSLPLLVKHSCVESLYFVRNFCVTYYFFGYIPKAWISTAMDLHPDSKLHP
LDTLTGLLDLSLFYHAWLCGIFLLITWHIAWLLFKIYATETHHFPVQPTFAEETDQCLPK
ILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAISRECLSLLSDLT
QRLIAQQEAAAANGRAKQPAGELKVSPQTPGALVPELMSLQSQRSHVVLRASMSSLVKSP
LMPLKTSPGSNVGSPFSSPALNSKMGTLDVNSSWHGSGQSPHVVRRGPKLWTSGSDLQMN
GSHHESSPVLSAPRAGSEAVQPRFIYTWLQNKQEQIKNFLSRRVLIMYFFSKHTEASIQA
VFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQEVVDRHFKLPHVSS
KPPRVSGSLVDTSYKTLRFALRAALKTALYRITTVFGEHLNAVQVSAEHKKRLQQFLEYK
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtggtactggtaataagcatcttcaatgctgaattttatgcagttgtgcca
tccataccctgctctcgactggcactgattgggaagattattcaccctcatcaagtcatc
cattcgatcgttcacgctgcaatggggatcttggttgcatggtgtgctgcagtgatgaca
aaaggaaggttccagtttctcactgtgccctgcacgccttcagacagcctagatgatgat
gtccctcagatgtgcctaaatgaatatcacttcttctttctcctttctggagccttcatg
ggatacagttacagccttttctattttattaacaatatgaattatttgccatttccaatc
atacagcaatacaagtacttgcgtttcagaagatctttgcctctgctggttaaacacagt
tgtgtggaatccctctattttgtgaggaacttctgtgtcacatactacttctttggttac
atcccaaaggcatggataagtaccgcaatggatcttcatccagacagcaaattacatcct
cttgacactctgactggattgttggatctctccttgttttaccatgcctggttgtgtggc
atcttccttctgattacctggcacattgcctggttgctcttcaaaatctatgctacggag
acacatcattttcctgtccagccaacttttgctgaggaaacagaccagtgcctgcctaag
atcctgaacagcaaccctcctctcattataaagtttttagccttacaagacctgatgtta
ctttcccagtactctcctgttcgacggcaggaagtctttagccttagtcagccaggtggg
cacccacacaactggactgcaatatcaagggagtgcttgagtcttctgagtgatctgacc
cagaggctgatcgcacagcaggaagctgctgcagcaaatggcagagcaaagcagccagca
ggagagctgaaagtatctccacagactccaggggcccttgtgccagaactcatgtccttg
cagtcccagagatcccatgttgttctcagagcttccatgtcttcgctggttaaatcaccc
ctgatgcccttaaagacatcgcctggctctaacgttggttcacctttcagctcacctgct
ttaaactccaagatgggaactctggatgtaaattcttcttggcatggctcaggccaaagc
cctcatgttgtgagaaggggaccaaagctttggacatcaggttcagatctgcaaatgaat
ggttcccaccacgaatccagcccagtgctctctgctccaagagctggaagtgaggcggta
cagccaagatttatttacacatggctgcagaacaagcaagagcagatcaagaacttcctg
tccagacgagtgctgataatgtatttcttcagcaagcacacagaagcctccatccaagcc
gtcttctctgatgcccaaatgcacatctgggctttggaaggtctgtctcatttggtagca
gcctcctttactgaagaccagtttggagttgtccaaactacactgccagctatcctgaat
actttactgactcttcaggaggttgtagacagacatttcaaactgcctcatgtttctagc
aagccccccagggtttcaggcagcctggtggacacgtcctacaaaacgctacggtttgcg
ctccgagcagctctgaaaacagccctgtacaggatcaccactgtgtttggagagcacctg
aatgcagtgcaagtgtctgcagaacacaagaaaagacttcagcaattcttggagtacaaa
gaataa
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