Dryobates pubescens (Downy woodpecker): 104307057
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Entry
104307057 CDS
T08526
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpub03016
]
104307057 (TRMT13)
Enzymes [BR:
dpub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104307057 (TRMT13)
Transfer RNA biogenesis [BR:
dpub03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104307057 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
104307057
NCBI-ProteinID:
XP_009906388
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MAAQQPAPGRGSPLPGRCAYFVQRKNRFCKMIPAPGRRFCGEHGQQEKENDRKRIPCPLD
PKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKDAAEITEKQVPISFLSKEDLENL
IIKLQKASNGLERSLKEQVLSHQALQEALNDPKNGESAFKHLKQQASILGNMEKLHLLGP
GRCFVEFGAGRGKLSHWVDVALQDADNVQFLLVERATTRFKVDGKHKRKDSVFERLQVDI
QHLCLNKVPVLVKKKLPVVGIGKHLCGAATDLALRCLVESYTACCDGENEEPAPKRSRSD
KAEEASDSSSDKECNQDDCKPVAGIVIALCCHHKCDWTHYVGREFFKSVGLGPVEFHYFQ
RMSSWATCGMRETTAKASKSEECEEQTNDTEEHDQTFSNTESASDTLQGILTVEERKRIG
CLCKLLIDHGRVEYLQQRGYQAALQYYTEPAVSLENVLLTAVPSSSLVPEPTK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagcagccggcgccgggccgcggctccccgctcccgggacgatgtgcctac
ttcgtgcaaaggaagaaccgcttctgcaagatgatcccggctcccgggaggcggttttgt
ggagagcatgggcagcaggagaaagaaaacgacagaaaaagaattccctgccctcttgat
cccaaacacactgtgtatgaggaccagctgcagaagcatttaaaaaaatgtaattcaaga
gagaagccaaaacctgtctactttgttcaagacatcaatgcaggtttaaaggatgcagca
gaaataacagaaaaacaagtaccaatctcttttctgtccaaagaggatctggagaaccta
attatcaagttgcaaaaagcaagtaatggcctggaacgtagcctgaaggaacaagtactg
tcccaccaagccctacaagaagccttaaatgacccaaagaatggggaatctgctttcaag
cacttgaagcaacaggcttctattttaggtaacatggaaaaattacacttacttggccct
ggaagatgctttgttgagtttggagctggacgaggaaagctgtctcactgggttgatgtt
gccttgcaggatgctgacaacgttcagtttttactcgtagaaagggcaactacaagattt
aaggtggatggaaaacataaaaggaaagattctgtgtttgaaaggcttcaagttgacatt
caacatttatgtttgaataaagtacctgttctggtgaagaaaaagctgccagtggtagga
attgggaagcatttgtgtggtgctgccacagatcttgctttgagatgcttggttgaaagt
tacacagcttgctgtgatggggaaaatgaagagcctgcaccaaagcgctccaggagtgat
aaggcagaggaggcttcagacagttcttctgataaggaatgcaatcaagacgactgtaag
cctgtagctggaattgtaatagcactgtgttgccatcacaagtgtgactggacacattat
gtaggcagagagttctttaaatcagtaggactggggccagtagaattccattatttccag
agaatgagcagctgggccacttgtggcatgcgagaaaccacagccaaagcctctaaaagt
gaagaatgcgaagagcaaactaatgacacagaagaacatgaccaaacattcagcaacaca
gagagtgcttctgacactttacaagggattcttactgttgaagaacggaagcgaataggc
tgcctctgcaaactgctgattgaccacgggcgggttgaatacttacagcaacgaggatac
caagctgcactgcagtattatacagagcctgctgtgtccttggagaatgtcctgctgaca
gctgtcccaagttcatctttggtaccagagccaactaagtga
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integrated database retrieval system
