KEGG   Dryobates pubescens (Downy woodpecker): 104307088
Entry
104307088         CDS       T08526                                 
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub03410  Base excision repair
dpub03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104307088 (POLL)
   03450 Non-homologous end-joining
    104307088 (POLL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dpub03400]
    104307088 (POLL)
Enzymes [BR:dpub01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     104307088 (POLL)
DNA repair and recombination proteins [BR:dpub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104307088 (POLL)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     104307088 (POLL)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 BRCT BRCT_2 HHH_5 LIG3_BRCT PTCB-BRCT NTP_transf_2 HHH
Other DBs
NCBI-GeneID: 104307088
NCBI-ProteinID: XP_009906420
LinkDB
Position
Unknown
AA seq 585 aa
MEPQGIVKAFPKRKKVRGDSGQIIPPKIPKEEGTETSEGWLKPVTAYVLQAGIGQARAKI
FHEQIVQNGGALHTQLSSEVTHVVVAEDMDCDRAFRLLKLTKIPPGLQLVKASWLSACIR
DQKLLSTAGYGVFIPRRLLIHGRYLEEGEVQKEQQQQVLGSEEIQPSADEGAAKPKTEAQ
VGDTLQQDLGTLGLQQLAEKDSDGEDIEGEDATVTQGDLEALISGCYPVKSSEETSDSSS
TVAQPVSKWVCAQSSNSKKMNYNQCITEKLEVLAKAYSVQGDKWRALGYSKAINALKSYH
KPVTSYQEACKIPGIGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTAQ
MWYQQGFRTLDDIRSRAALTSQQAVGLRHYEDFLERMPREEAAQIEQTVRQAALAVKPGL
VCVACGSYRRGKPTCGDVDVLVTHPDGQSHRGVFSKLLDSLHRSGFLTDDLVSQEDNGAQ
KKYLGVCRLPGPAQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKAMSLSEH
ALSTAVVRGPGGAKVASGRTLPTPTERDVFVQLGLPYREPSERDW
NT seq 1758 nt   +upstreamnt  +downstreamnt
atggagccacaagggattgtcaaagcctttcccaaaaggaagaaggtgaggggtgactcg
gggcaaatcatccctccaaagatcccaaaagaggaaggcacagagacatctgaggggtgg
ctgaaaccggtcactgcctatgtgttgcaagctggcatcggccaagccagggccaagatc
ttccatgagcagattgtccagaatgggggtgctctacacacccagctgtcctcagaggtg
acacacgtcgttgtggctgaggatatggactgcgaccgagcctttcggctcctcaaatta
accaagatccctccagggctgcagctggtgaaggcctcgtggctaagtgcttgcatcaga
gatcagaagctgctgagtactgctggctatggtgtctttatccctcgcaggcttctgatc
catggcaggtacttggaggagggagaagtacagaaagagcaacagcagcaggtcctgggc
agtgaagagatccagccctcagcagatgaaggagcagcaaaaccaaaaactgaagcacag
gttggggatactttgcagcaagacctgggcacccttggactgcagcagctggctgagaaa
gactctgatggtgaagacattgaaggagaagatgctactgtcacccagggagatctggaa
gcactgatttctggctgctaccctgtgaaatcatcagaagagaccagtgacagctcttcc
acggtggcccagcctgtcagcaagtgggtttgtgcccagtcctccaacagcaagaagatg
aattacaaccaatgcatcacagagaagctggaagtgctggctaaggcctactctgtccag
ggggacaaatggagagctctgggttactccaaagccatcaatgccctgaagagctaccac
aaaccagtcacctcctatcaggaggcctgtaaaatcccagggatcgggaaacggatggca
gagaagatcctggagatcctggagagcgggcacctgcgcaagctggatcacatcagcgag
agcgtgcctgtgctggagctcttctccaacatctggggagcaggggtcaagacagctcag
atgtggtaccagcagggcttccggacgctggatgacatccgcagcagggcggcgctcacc
agccagcaggccgtggggctgaggcactacgaggacttcctggagcgcatgcctcgggag
gaagctgcacagatcgagcagactgtcagacaagctgccctggctgtgaagcctggactc
gtgtgtgtggcctgtgggtcctaccgtcgggggaagcccacctgtggagatgtggatgtg
ctggtcactcacccagatgggcagtcccaccgtggagtgttcagcaagctgcttgacagc
cttcacagaagtggcttccttacggacgacctggtgagtcaggaggacaacggcgctcag
aagaagtacctgggggtgtgccgcctgccggggccggcgcagcgccaccgccggctggac
atcatcgtggtgccctacagcgagttcgcctgcgccctgctctacttcaccggctcggct
cacttcaaccgctccatgcgggccctggccaagaccaaggccatgagcctctcggagcac
gccctcagcaccgccgtggtgcgaggccccgggggcgccaaggtggcgtctggccgcacg
ctgcccacgcccaccgagagagatgtcttcgttcagctggggctgccgtaccgggagccc
tcggaacgggactggtga

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