Dryobates pubescens (Downy woodpecker): 104307115
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Entry
104307115 CDS
T08526
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04110
Cell cycle
dpub04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104307115 (SMC3)
04114 Oocyte meiosis
104307115 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104307115 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dpub00535
]
104307115 (SMC3)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104307115 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
104307115 (SMC3)
Proteoglycans [BR:
dpub00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104307115 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104307115
NCBI-ProteinID:
XP_009906452
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gacccattcagctcaaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaat
tttttttatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgcccagagcag
cgactggctttgttgcatgaaggtacaggtccccgtgttatttcagcctttgtggagatt
atttttgacaattccgacaacaggttaccgatcgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccagtatttcttagacaagaaaatggtgacgaaaaatgat
gtaatgaatcttctggaaagtgctggattttctcgcagtaacccctactatattgtcaag
caaggaaagatcaaccagatggccacagctcctgactctcaaagactaaagttactaaga
gaagtagctggtaccagagtgtatgatgaacgtaaagaagagagtatttcactaatgaaa
gaaacagagggcaagcgagagaagatcaatgagttgctgaaatacattgaagagcgactg
catactctggaagaggagaaagaagagctggctcagtaccagaaatgggataaaatgagg
agggcattggaatacaccatttataatcaagagcttaatgaaacccgagctaagcttgat
gagctttctgccaaacgagagacgagtggagagaaatcaaggcaactgagagatgcacag
caagatgctagagataaaatggaggaaatagagcggcaagttcgagagctgaagacaaaa
atttcagcaatgaaagaagagaaagaacaacttagtgctgaaagacaggaacagattaaa
cagaggacgaaactagagctgaaggctaaagacctacaggatgaattagctggcaacagt
gaacaaaggaaaagactgttaaaggagaggcaaaagcttcttgagaaaattgaggagaag
cagaaagaattagcagaaacggagccgaaatttaacagtgtaaaagaaaaagaagagaga
ggaattgctagactggcacaggccacgcaggaaagaacagatctttatgcaaaacaaggt
cgaggaagccagtttacttccaaagaagaaagggacaagtggataaagaaagaactgaag
tctttagatcaagccatcaatgacaagaagcggcagattgcagccatacacaaagattta
gaggatacagaggcaaacaaggagaaaaatttggaacagtacagtaaactggaccaggat
cttaatgaagtgaaggctcgtgttgaagaactggacagaaaatactatgaagtgaaaaat
aaaaaggatgaactccagagcgaaagaaattatctgtggagagaagaaaatgctgaacaa
caagctcttgctgcaaagcgggaggatttagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaatggtatagacagcataaacaaagttctggagcacttccgt
cgaaaaggcataaaccagcatgttctgaatggctatcatggcattgtcatgaataacttc
gaatgtgaacccgctttctacacctgtgttgaagttactgcagggaacaggctgttctac
cacattgtggattctgatgaggtcagtacaaagatcctaatggaatttaacaagatgaac
cttcctggagaagttactttcctccctctgaataagctggatgttagagatactgcttat
cctgaaactaatgatgccattcctatgatcagtaaactgagatacaacccaagatttgac
aaagctttcaaacatgtttttggaaagactctaatttgtcgtagcatggaagtgtctacc
caactagccagagctttcactatggattgtattactctggaaggtgatcaagtcagccat
cgtggtgcattgactggaggttattacgacaccaggaagtctcggcttgagctgcagaaa
gatgttagaaaagcagaagaagaacttggtgaactcgaagcaaagctcaatgaaaactta
cgcagaaacattgaaaggattaataatgagattgaccagctaatgaaccaaatgcagcaa
attgagacacagcagagaaagttcaaagcctctcgagacagtattttgtcagagatgaaa
atgctgaaggagaaaagacagcagtctgagaagacatttatgcctaagcaacgcagtttg
cagagcctggaggcaagtttacatgctatggagtcaaccagagaatcattgaaagcagaa
ctggggactgatttgttatctcagctcagtcttgaagatcagaaacgtgtggatgctctt
aatgatgaaattcggcaactgcagcaagaaaacagacaacttttgaatgaaagaattaaa
ttagaaggtattattacaagagttgaaacatatctcaatgagaacctgagaaaacgctta
gatcaagtggaacaagaactgaatgagcttcgagaaacagaaggtggcacagttctgact
gccacaacgtcagagcttgaggctatcaacaaacgagtgaaagacacattggcacggtca
gatgatctggataattctattgacaaaacagaagcaggaattaaagagctacaaaagagc
atggaacgctggaagaacatggaaaaggagcacatggatgccattaaccatgatactaaa
gaacttgagaaaatgactaacagacaaggcatgcttctcaagaagaaagaggaatgcatg
aagaaaatccgagagttgggttcacttccacaggaggcttttgaaaagtatcagacttta
agtttaaagcagttattccgcaaactggagcagtgcaatacggaactgaagaagtacagt
cacgttaataaaaaagccttagatcagtttgtaaatttctcagagcagaaggaaaaactg
ataaaaagacaagaggagctggacaggggctacaaatccatcatggagctgatgaatgtc
cttgagctcaggaaatatgaggctattcagctgacttttaaacaggtgtcaaaaaatttc
agtgaagtattccagaagttagtcccaggtggcaaggccacactagtgatgaagaaagga
gatgtggagggcagtcagtcccaggatgagggtgagggcagcaccgagagtgaaagagga
tctggatctcagagcagtgttccatctgtagatcagttcactggagttggcataagggta
tcgttcacagggaagcagggtgaaatgagagaaatgcagcaactttcaggaggacagaaa
tccttagtagccctagccctgatatttgcaatccagaagtgcgatccagctccattttac
ttatttgatgaaattgaccaagccttggatgctcagcacagaaaagctgtttcagatatg
attatggaactggctgaacatgctcagtttattaccacaacttttaggcctgaactgctt
gagtcagctgacaagttctatggtgtaaagttcagaaacaaggttagtcatatcgacgtg
atcacagcagaaatggccaaagactttgtagaagatgacaccacgcatggttaa
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integrated database retrieval system
