Dryobates pubescens (Downy woodpecker): 104307128
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Entry
104307128 CDS
T08526
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpub03016
]
104307128 (TRUB1)
Enzymes [BR:
dpub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104307128 (TRUB1)
Transfer RNA biogenesis [BR:
dpub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104307128 (TRUB1)
Prokaryotic type
104307128 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
104307128
NCBI-ProteinID:
XP_009906466
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MLSTMLAGSKKYTAIGLLGKATDTLDATGKVTEEKPYDQITKGDLENVLQKFTGDIMQVP
PLYSALKKDGERLSTLMKRGEAVEAKPARPVKVYSLSLQQFQPPLFTLDVECGGGFYVRS
LVSDIGKELSTCATMQELTRTKQGPFTLEEHALYEDKWTIDEIARSLEHCTSLLSGEPSH
KKLKTEHPGETAGSCEDK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtactatgttggcaggttccaagaagtacactgccattggactgctgggcaaa
gctactgatacgttagatgctacaggaaaagtaactgaagaaaaaccttatgaccagata
acaaaaggagaccttgaaaatgtgctgcagaagttcacaggggacataatgcaggttcct
ccactctattcagctttgaagaaggatggagaaaggctatcaactctgatgaagagagga
gaagcagtcgaggccaagcctgctcggccagtaaaagtgtacagtctctctctccagcag
ttccagccaccactgttcacactggatgttgaatgtggtggtggcttttatgtcaggagc
ctggtcagtgacattggcaaagaactctctacctgtgccactatgcaagagctgacccga
accaaacaagggccgtttacgctagaggagcatgccctttatgaagacaaatggacaatt
gatgagattgcacgatccttggagcactgcacatctcttctctcaggagagccatctcat
aaaaaattgaagacagagcatcctggtgaaactgctgggagctgtgaagataagtga
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integrated database retrieval system
