Dryobates pubescens (Downy woodpecker): 104307150
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Entry
104307150 CDS
T08526
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpub03009
]
104307150 (RRP12)
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
90S particles
Other 90S particles
104307150 (RRP12)
Pre-60S particles
Other pre-60S particles
104307150 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
104307150
NCBI-ProteinID:
XP_009906487
LinkDB
All DBs
Position
Unknown
AA seq
1253 aa
AA seq
DB search
FTRAEKSNLTVDAVKLHNELQSGSLRLEQSSDNTQLRMEEDDAVEATTEKSSGTFLSGLS
DCTNITFSRVQRFWESNSAAHKEICAVLAAVTEVIRSRGGKESETEYFAALMTTLEAVES
PESLAAVAYLLNLVLKRVPSPVLIKKFSDASKAFMSIMSSQACSSSTSALRWILSCLATL
LRKQDLAAWSYPVTLQVYHGLLSFCVHTKPKVRKAAQHGVCSVLRGSEFMFGDSAPDHHP
AAPSTAKFCVQEIEKAGGTKEATTTLHVLALLQDLLPCFPAAVVKTCCETLLRVMTLSHV
LVTACAMQAFHRLFSAQASVACLPAELNAQIITALYDYVPNTSDLQPLVTWLSTMERAHI
NLGRLQKDLCWAHMPRFFSAAMNCFLSPHSQVVLDAAQTLENLLNECVAPHMEDLGTISA
SAPAPAGHLCKMFRSVEEGLTYRFHAAWDRVLRVLEVFFKTCGKQCHPIMRKCLRSLCDL
RLSPHFPYTAEVDRAVGAAVSTMGPEVLLEAVPLEIDGKEETLDFPRSWLLPVLRDYVQG
ARLGFFTSYFLPLAATLKSRALEFTQAGKSMEAKIYDTLQWQVWTLLPGFCTHPTDVLGA
FKGLARTLGMAISERPDLRPTVCQALRTLIHKGCETDAERAEVGRFAKNFLPILFNVYSQ
PQESGGSSAQRRSVLDTVRAYLTITDPQMVCGFLQKASLKLTSPENTEFARLSILDLVVA
MAPYADEQSLDSLYRTIQPSFQSKERSMQKKAYRALEEVCAAPRAPCQAFVRSHLQDLQT
ALLESLKSAASPAKRPRLRCLFHIVKQLSAEHEPFITALVPEVILCTKEVSVGARKNAFL
LLVEMGQAFLRFGPTPQEAVQRFLLLVYAGLTGSVTMISCTVLALTRLFFEFKDHMELSV
VEQLLQNICLLLASRTRDVVKAALGFLKVTLLLVDPKQLAKHVQAMLEALGNLSDDMRRH
FRMKLRNLFTKFIRKFGFELVKGLLPAEYHKVLVNIRKAEARSRKQRALRQVAADTEEKE
APPTQARGDSMEEILADSEDEGEEEEEQQRSKEWRKQGRQKGQAWLKEGEEDEPLNFLDP
NVSQRVLATKPGSKRSRGVSHDFQVSEDGRLIIHEEEEEVDDDEAKGVDEEMADVLQDMG
LRSKKSQKRRFREEPDDEEPEAGTYSQYRAGGSGIHRQLNKEPALGAEYRSKKGKGDVKK
KGQLDPYAYIPLNRARLNRRKRAKMQGQFKGLMKGAQRGAKAGHRNRRKAQRP
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
ttcacccgggcagagaaaagtaacttgacagtggatgctgtgaagttgcacaatgagctg
cagtcggggtccctgcgtttggagcagtcgagtgataacactcagctccgcatggaagag
gatgatgctgtggaggccaccactgaaaagtcctctggcaccttcctgagtgggctgagc
gactgtaccaacatcaccttcagcagggtgcagcgcttctgggaatccaattctgctgct
cacaaagagatctgtgctgtgctggcagctgtgacagaggtgatccgctcacgggggggc
aaggagagtgagacggagtactttgctgcactgatgacaacgctggaggcagtggagtcc
ccagagtctcttgctgctgttgcctacctgctcaaccttgtcctaaagcgcgttccgagc
cctgtgctcattaagaaattctcagacgcctcaaaagccttcatgagtatcatgtcctcg
caggcctgcagcagctccacctctgccctgcgatggatcctctcttgtctggccacactg
ctgcggaagcaggacttggcagcctggagctaccctgtcacactccaggtctatcatggc
ttgctgagcttctgtgttcatactaagcccaaggtgcggaaggcagcgcagcatggtgtg
tgctctgtcctgagaggcagcgagttcatgtttggagactcagcccctgaccatcaccct
gcggcaccctccactgccaagttctgtgtgcaggagattgaaaaagctggaggcaccaag
gaggcaaccactaccttgcatgtgcttgccctgctgcaagaccttctgccctgcttccct
gcagccgtggtgaagacctgctgtgagaccttgctccgagtcatgaccctcagccatgta
ctggtgacagcgtgtgccatgcaagccttccacagactcttcagtgcccaggccagtgtg
gcctgcctgccagctgagctcaatgcccagatcatcactgccctctacgactatgtgccc
aacacgagtgacctgcagccactggtgacctggctgtccaccatggagcgggcacacatc
aacctgggcaggctgcagaaggacctctgctgggctcacatgccccgcttcttctctgct
gccatgaactgcttcctctccccacattcccaggtggtgttggatgcagcacagaccctg
gagaaccttttgaatgagtgtgttgctccccacatggaggacctgggcaccatctctgca
tctgccccagctcctgctggccacctgtgcaagatgttcagatcagtggaagaaggcctg
acgtaccgtttccacgcagcatgggacagggtgttgcgggtgctggaggtgttctttaag
acatgtgggaagcagtgccaccccatcatgaggaagtgcctccggtccctgtgtgacctg
cgtctctccccacacttcccctacaccgctgaagtggaccgagcggtaggggctgctgtg
agcaccatgggccctgaggtgctgctggaagctgtgcccctggagatcgatggcaaggag
gagactctggatttcccccgcagctggcttctgccagtgctgcgggactatgtgcagggt
gcacggctcggcttcttcaccagctacttcttgcccttggcagccaccctgaaaagcaga
gccctggagtttacccaggctgggaagagcatggaggccaagatttatgacacgcttcag
tggcaggtgtggaccctgctgcctggcttctgcactcacccaacagacgtgctgggggcc
ttcaaggggctggcccgcaccctgggcatggccatcagcgagcgtccagatctccgcccc
accgtgtgccaggccttgcgcaccctcatccacaaaggctgtgagacagatgcggagcgg
gcagaagtaggtcgctttgccaagaatttcctgcccatcctcttcaatgtgtacagccag
ccccaggagtccgggggcagcagtgctcagcgccgctccgtgctggacaccgtccgtgct
tacttgaccatcactgatccccagatggtgtgtgggttcctgcagaaagcgagcttgaag
ctgaccagtcctgaaaacactgagtttgccagactctccatcctggacctggtggtggcg
atggcaccctatgctgatgagcagtctctggattccctgtaccgcaccatccagccttcc
ttccagagcaaggagcgcagcatgcagaaaaaggcataccgagcgctggaggaggtgtgc
gccgccccccgcgcgccctgccaggccttcgtccgctcccacctgcaggatctgcagaca
gcgctgctggagtcgctcaagagtgcggcatccccagccaagaggccccgactgaggtgc
ctgttccacattgtgaagcagctctctgcagagcacgagcccttcatcactgccctggtc
ccagaggtcattctgtgtaccaaagaggtgtcagtgggtgcccgcaagaatgccttcctg
ctgctggtggagatggggcaggccttcctccgctttggacctactccccaagaggctgtg
cagcggttcctgctcctggtctatgcggggctcacggggtcggtcaccatgatcagctgc
acggtgctggcactgacccgcctgttcttcgaattcaaagatcacatggagctgagtgtg
gtggaacagctgctgcagaacatctgcctgctgctggcctcccgcacacgggatgtggta
aaggcggccttgggcttcctcaaggtcacactgctgctggtggaccccaaacagctggcc
aagcacgttcaggcaatgctggaggccctggggaacctttcggatgacatgagacgccac
ttccgaatgaagctgcggaacctcttcaccaagttcatccgcaagtttggctttgagctg
gtgaaggggctgctgccagctgagtaccacaaggtgctggtgaacatccgcaaggcagaa
gcccggagccgcaagcaacgtgccctgaggcaggtggccgcggatacggaagaaaaggag
gcaccaccaacacaggccagaggagacagcatggaagagattctggctgactctgaggat
gaaggggaggaagaggaggaacagcagcggagcaaggagtggaggaagcaaggacggcag
aagggccaggcctggctgaaggaaggggaagaggatgagcccctcaacttcctggacccc
aatgtgtctcagcgggtgctggccaccaagccaggctccaagcggtccagaggagtaagc
catgacttccaggtgtctgaggatgggcgcctgatcatccatgaagaggaggaggaggtg
gatgatgatgaagccaaaggagtggacgaggagatggcagatgtgctgcaagacatgggt
ctccgcagtaagaaaagccagaagcggcgtttcagagaggaaccagatgatgaggaacct
gaggctgggacctactctcagtacagagctggaggctccgggatccaccggcaactgaac
aaggagccagcccttggtgcagagtacagatccaagaaaggtaaaggtgacgtgaagaag
aagggccagcttgacccctatgcctacatccccctgaacagagccagactcaacagaagg
aagcgggcaaaaatgcagggccagttcaagggcctgatgaagggagcccagcgtggagcc
aaggctggccacagaaaccgccggaaggctcagcgcccctga
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integrated database retrieval system