Dryobates pubescens (Downy woodpecker): 104307174
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Entry
104307174 CDS
T08526
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104307174 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104307174 (TAF5)
03036 Chromosome and associated proteins [BR:
dpub03036
]
104307174 (TAF5)
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104307174 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
104307174 (TAF5)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104307174 (TAF5)
STAGA complex
104307174 (TAF5)
TFTC complex
104307174 (TAF5)
SAGA complex
104307174 (TAF5)
SLIK complex
104307174 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
104307174
NCBI-ProteinID:
XP_009906511
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MAALPEEPAEVVAVKQDPEAGTPPQPPAAPPAAAAPPPPPFLGGGVVVEDQPDVSAVLSA
YNQQGDPALYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAKSFF
ERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEK
QNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEFDV
PLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNRIPLPELKDSDKLDKVMNM
KEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKL
RSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSED
GTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFA
GHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFL
ATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAF
EDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactacctgaggaaccggcggaggtggtggcggtaaagcaagaccctgaggcg
gggacgcctccgcagccccctgctgcacctccagctgctgctgccccccccccccccccc
ttccttggaggaggtgttgttgtggaagatcagccagatgtgagtgcagtgttgtctgcc
tacaatcaacagggggatccagcactgtatgaggagtactacagtggattaaaacacttc
attgagtgttccctggactgtcatcgggcggaattgtctcagctgttttatcctctcttt
gtgcacatgtacttggaattggtctacaaccaacatgagagtgaagcaaagtcttttttt
gaaagatttcatggggatcaggagtgctattaccaggatgacctgcgtgtattatctagc
ttaaccaaaaaagaacacatgaaaggtaatgagaccatgctggattttagaacgagcaag
tttgtgctgcgtatttcccgtgactcttaccagctcttgaagaggcatcttcaggaaaag
cagaacaatcagatctggaacattgtgcaggagcatctttacattgatatctttgatgga
atgccccgcagtaaacaacagatagatgctatggttggaagcttggctggggaggcaaaa
cgagaggctaataaagcaaaggttttctttggcttattgaaagaaccggagttcgatgtg
cctttggatgatgaagatgaagaaggagaaaatgaggaaggaaagccaaagaagaaaaaa
cccaaaaaagatagtgtaggatcaaaaagtaaaaaacaagaccctaatgctcctccccaa
aacagaattcctctgcctgaactgaaagactctgacaagctggataaagtaatgaacatg
aaggaagctgcaaggcgtgtgcgtcttggcccagagtgcttgccctccatctgtttctac
acattccttaatgcttaccagggtctgactgcagtggatattacagatgactccagcatg
attgtaggaggctttgctgactctactgtcagagtgtggtctgtgacgccgaaaaagcta
cggagcgtgaaaacagcagcagacctcagtctcatcgacaaagaatcggatgatgtcttg
gagaggatcatggatgagaaaacagcaagtgagttgaagattttatatggtcacagtgga
cctgtctatggcaccagcttcagtcctgataggaactatttgttgtcctgttctgaggat
ggcactgtcagattgtggagtctccaaacattcacgtgtttagtgggatataaaggacac
aactatccagtatgggatacacagttctctccttatggttattactttgtgtcaggggga
catgacagagtggctcgcctgtgggcaacagatcactaccagcctttacggatatttgct
ggccaccttgctgatgtgacgtgtacccgatttcatccgaactccaactacattgccacg
ggctcagcagacaggactatacggctctgggatgttttgaatgggaattgtgtgagaata
ttcactgggcataagggaccaattcattcactggcattttctcctaatggacgattcctg
gctactggagcaacagatggcagagttctgctgtgggatattggacatggcttgatggtt
ggcgaattgaaagggcacacagacactatctacgcactcagattcagtagagatggggag
attttagcatcaggttcaatggataatacagttcgtctgtgggatgctgtgaaggcattt
gaagatttagaaactgatgactttactacagccactggacatataaacttgcctgaaaac
tcacaggacttgttattaggtacatacatgaccaaatcaaccccagttgtacacctccat
ttcacacgcagaaacttgctgctggctgcaggagcctacagttcacagtga
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integrated database retrieval system
