KEGG   Dryobates pubescens (Downy woodpecker): 104307256
Entry
104307256         CDS       T08526                                 
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dpub03036]
    104307256 (WDHD1)
Chromosome and associated proteins [BR:dpub03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    104307256 (WDHD1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Ctf4_C WD40 HMG_WDHD1 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_Vps41 HMG_box Beta-prop_TEP1_2nd eIF2A Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 HMG_box_2 Beta-prop_WDR75_2nd Beta-prop_SCAP
Other DBs
NCBI-GeneID: 104307256
NCBI-ProteinID: XP_009906599
LinkDB
Position
Unknown
AA seq 1100 aa
MPSAQKPMRYGHTEGHTDVCFDDTGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGKLITAISNNTVQVHTFPEGAPDGILTRFTMNANHIIFNADGTKIAAGSSDFMIKV
VEVSDSSKQKTFRGHDAPVLSLSFDPQDVYLASSSCDGSVRVWKIADQTCTTSWPLLQKC
NDVINAKSICRLGWQPGSGKLLAIPVDRVVKLYRRETWDSQFDLSDAFITQPLNVVAWSP
SGQHLAAGSVNGSIVVWNVETQECIERMKHEKNYSVCGLAWHPKYNQIAYTDTEGNLGLL
EHIGDGKKPHDKVASTVTKDYNDLFDGDDDDYLNGDIESQSSPKPGADEDDDDDIMPTSG
HLRRTIVDDDDDNSLDIGMIKANSNLLEKEDDNDDQSGGFPALPPTSTQQPFYDGPLPTP
KQKPFQSGSTPTHLMHRFMVWNSVGIIRCYNDEQDNAIDVEFHDTSIHHATHLPNSLNHT
MADLSAEAILLACESTEELASKLHCIHFGSWDANKEWTVDMPKDEDIEAICLGQGWAACA
TSALLVRVFTVGGVQKEIFSLPGPVVSMAGHGEQLMVIYHRGTGFDGDQCLGVQLMELGK
KKKQILHGDPLSLTRKSHLVWVGFSAEGTPCYVDSEHCKGKSDHYWVVGIHENPQQLRCI
PCKGARFPPTLPRPAVAILSFKLPYCQVTTEKGQMEEQYWRSLVFHNHVDYLSKNGYEVD
ENAKSQALKEQQELLMKLFALSCKLEREFRCMELADLMTQSVVNLAIKYASRSRRLNLAQ
RLSEMAVEKASELAAAEEDEEEEEDFRKHSRARYSNAPTEWGQPPVRNVQKDQEMEDAEE
SDGSEEEEETPEVPKQRPNPFSRSVTSAEVPAPKSIVITSGSQGRVNPFKVSSNKKEPVV
PSANILDTMTKQSKKTSLASSRAANKQNPPVIKPLIPKPKSKQALAASFFQPHAPNSSAK
VVEEREEKAGNESQEAKVTAQENTENRRPRTGFQMWLEENRANILTDNPALDEAEVIKEG
MSRFRVLSAEERMAWTEKAKGGTGSDLAEDKKRKRPPAEDEDEAKKKQEQNSEDSNLPKK
SKPLDQSTNVRLSAFAFKQS
NT seq 3303 nt   +upstreamnt  +downstreamnt
atgccatcagcacaaaagccaatgcggtatggccatactgaaggtcacacagatgtctgc
ttcgatgatactgggagctgcattgtaacttgtggcagtgatggagacgttagaatttgg
gaaaacctggatgacgatgatccaaagtccattaatgtaggagaaaaggcctattcgtgt
gctctgaagaatgggaaactgatcacagcaatatcaaacaacactgtccaggtacataca
ttccctgaaggagctccagatggcatccttactcgtttcaccatgaacgcaaaccacatc
atctttaatgctgatggtaccaaaattgctgctgggtcaagtgacttcatgatcaaagtt
gtggaggtgtctgatagcagcaagcagaaaacattccgaggacatgatgctcctgtttta
agcctgtctttcgacccccaggatgtttacctggcatcctcgagctgtgatgggtctgtc
agggtatggaaaattgcagatcagacatgcacaacaagctggccgctgctgcagaaatgt
aatgatgtgataaatgctaaatcaatatgcaggcttggctggcaacctggcagcgggaag
ttgctggcaattcctgtagatcgagttgtgaaactatacagaagagaaacgtgggacagt
caatttgatctatcagatgcattcatcacacagcccttgaatgttgtggcctggtctcct
tctgggcagcatctggcagctggaagtgtcaatgggagtatagtggtgtggaatgtggaa
acccaggagtgcatagagaggatgaagcatgagaaaaattactcagtttgtggactggca
tggcaccccaaatacaaccaaattgcttacacagatactgaaggaaatctggggctgttg
gaacatatcggtgacggaaagaaaccgcatgacaaggttgccagtacagtgacaaaggac
tacaatgatctctttgatggagatgatgatgactatttaaatggagatattgaatcacag
tcttccccaaagcctggagctgatgaagatgatgatgatgacattatgccaacttcaggc
catctgagacggacaatagttgatgatgatgatgataactcgctagatattgggatgata
aaagctaattccaatctcctggaaaaggaagatgacaatgatgatcagtctggtggcttt
ccagctttaccaccaacatctacacagcaacctttctatgatgggccattgccaaccccc
aagcaaaagccattccagtctggctccactcctacacatctcatgcatcgtttcatggtg
tggaattccgttggcatcattcggtgttacaatgacgagcaagacaacgctatagatgta
gaatttcatgatacctccatacaccatgcaacacacctgccaaactccctaaatcacaca
atggctgacctctctgctgaagctattttactggcctgtgagagtacagaagaacttgca
agcaaactgcactgcattcattttggctcatgggatgcaaacaaggagtggacagtagat
atgccaaaggatgaagacattgaggccatctgtctagggcaaggctgggctgcttgtgcc
actagtgctttgctggttcgtgtatttacagttggaggagttcagaaagagatcttcagc
cttccaggtccagtggtgtctatggcaggacatggagagcagttgatggttatttatcac
agagggactgggtttgatggggaccagtgccttggagtacagctgatggagctaggaaag
aagaaaaaacagattttgcatggagatcctctctctctgacaagaaaatcccatttggta
tgggttggattctctgcagaaggtaccccttgttatgtggattcagagcattgcaaagga
aaatcagatcattattgggtagttggcatccatgaaaatccccagcagctcaggtgtatt
ccttgcaaaggagcccgattccctcctacgctgccccggcctgctgtagcaatattatca
tttaaacttccttactgtcaagttaccacagaaaagggacagatggaggagcagtactgg
cgttctttggtatttcacaaccatgtggactacttatcaaaaaatggctatgaagtggat
gaaaatgctaaaagtcaggcactgaaggaacagcaggaacttctaatgaagctctttgct
ctttcttgtaaactggagcgtgaatttcgctgcatggaacttgctgacctcatgacacaa
agcgttgtgaatttagctatcaagtacgcgtctcgctctcggagactaaatttagctcag
cgacttagcgaaatggctgtagaaaaagcaagtgagttggcagcagcagaggaagatgaa
gaggaggaagaagatttccgaaagcactcgcgtgctcgttacagcaacgctcccacggag
tggggtcagccgccggttagaaatgttcaaaaggaccaagaaatggaagatgctgaggag
agtgatggctctgaggaggaagaagaaacaccagaagtgcctaaacagaggccaaatcct
ttctccagaagtgtcacttcagcagaggtccctgctccgaagtccattgtgattacctca
ggcagccaaggacgagtgaatccctttaaggtgtcatctaacaaaaaggagccagtggtc
ccctcagcaaatattctagacacgatgaccaagcagtcaaagaaaacttctttggctagc
agtcgagctgcaaacaagcagaaccctccagttataaagcctctgattcccaaacccaag
tccaagcaggctttagcagcctccttcttccagcctcatgcacctaactctagtgcaaaa
gtagtggaagaaagagaagaaaaagctggaaatgagtcacaggaagcgaaagtcactgca
caggagaacaccgaaaacagaagaccaagaacaggattccagatgtggctggaagagaac
agagcaaacattttgacagataatcctgctctggatgaagcagaagtaataaaagaaggc
atgagtcgattcagagtgctgtcagcagaagaaagaatggcatggactgagaaagcgaaa
ggaggaacaggtagcgatttagcagaagataaaaaacggaaacgtcccccagctgaggat
gaggatgaagcgaaaaagaaacaggagcaaaattcagaggactcaaacttacccaaaaaa
tcaaagcctttagatcagtctacgaacgtccgattgtcagcttttgccttcaagcaaagc
taa

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