Dryobates pubescens (Downy woodpecker): 104307279
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Entry
104307279 CDS
T08526
Name
(RefSeq) RNA-binding protein 7-like
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104307279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104307279
03009 Ribosome biogenesis [BR:
dpub03009
]
104307279
Messenger RNA biogenesis [BR:
dpub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
104307279
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
Pre-60S particles
RNases
104307279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RRM_1
RRM_5
Rv2179c-like
RRM_7
Motif
Other DBs
NCBI-GeneID:
104307279
NCBI-ProteinID:
XP_009906625
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MGAAAAEADRTLFVGNLDPKVTEELIFELFHQAGPVIKVKIPKDRDGRPKQFAFVNFKHE
ESVPYGLSLLNGIKLFGRPIKIQFRSGSSHVSQDGSTAGSLHGAAGTGLSSTPHLAPNCS
RYDRSPDSVAAAGFSSVQRCLPSAGNLQRQAPPFGGKYELPGYAPPGYQHPPHAFHPPAA
LPRRPEPPAVRKVRLSAHPYHPEGRHLGREAASLIPELTGGPNLIINQPDELLEGMSEWC
KEHHGKSGLTKAVKESKISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQ
FMRHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDIRESIKELQFYRDSIFKR
KTEEKKRKLIENGESEKASS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggcggcggccgaggcggaccggactctcttcgtggggaatctggaccccaag
gtcaccgaggagctcattttcgagctcttccaccaggcgggtccggtgatcaaggttaag
atccctaaggacagagacggcagacccaagcagtttgcttttgtgaacttcaaacacgaa
gaatccgtcccctatggcctgagcctgctcaacggcatcaagctgttcgggaggcccatc
aaaatccagttccgatcagggagcagtcatgtgtctcaggatggcagcacagccggttcc
ctgcatggagctgccggcaccggcctgtccagcacgccgcacctggccccgaactgcagc
aggtacgacaggagcccagacagtgtggcagcagcaggcttctcgtcggtgcagcggtgc
ctgccctcagctggcaacctgcagagacaagcaccccccttcgggggcaagtacgagctg
cccggctatgccccgcctggctaccagcaccctcctcacgccttccacccgccggcagcc
ctgccacggcgcccggagccgccagctgtgcgcaaggtccggctgagcgcccatccctac
caccccgagggccggcacctcggccgcgaagcagcttccctgatccctgaactcactggg
ggtcccaacctgattattaatcagccagacgagctgctggagggcatgtctgagtggtgc
aaggagcatcacgggaagtctggcctcaccaaggccgtgaaggagagcaagatctccctg
cagcaggcagagtacgagttcctgtccttcgtccggcagcagacacccccggggctgtgt
cctctggcagggaactctgtgcatgcagacaagaagttcctggacaagtacatgccgcag
ttcatgaggcacctccactaccgcatcatcgacgtcagcaccgtcaaggagctctgcaga
cgctggtatccagaggagtacgagtttgcaccaaagaaagcagcttcccacagagcgctg
gatgacatcagggaaagcatcaaggagctgcagttctacagagacagcatcttcaagagg
aaaacggaggagaagaagaggaagctgatcgagaatggggaaagtgagaaggcctccagc
tga
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