Dryobates pubescens (Downy woodpecker): 104307310
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Entry
104307310 CDS
T08526
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpub03000
]
104307310 (PRDM4)
Transcription factors [BR:
dpub03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104307310 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-met
PyrI_C
Mu-like_Com
Motif
Other DBs
NCBI-GeneID:
104307310
NCBI-ProteinID:
XP_009906657
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MNEMNLSPVGMDQLTSSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPSLSSL
PSALSLMLPMGIGDRGVMCGIPERNYTLPPPPYPHLESSYFRHILPGILSYLADRPPPQY
IHPNTMNVDSNPALSVSSNPSALDPYQPSGTVGLEPGIVSMDSRTVNTHGAQNLHPSDSH
EVALDTTITMESVSRVTSPISTDGMTEELTMDDVAGDHSQIPNGSRSHEPLAVDTVGSNL
TSDAVGHGSVIPIHGSTLELPVVMEPDHIAGRVTGMSDSTLNDSIHTVAMSTNSVSVALS
TSHNLASLDSVALHEVGLSLEPVAVSSINQEVAMGPSHVDVSADNLAFVPSSLQMEDSNS
NKENMATLFTIWCTLCDKAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLILRQSIMGAE
AGVWARETIPVRTCFGPLIGQQSHSLEVADWTDKAASHIWKIYHNGVLEFCIITTDENEC
NWMMFVRKARNREEQNLVAYPHDGKIYFCTSRDIPPEHELLFYYSRDYARQLGVPEHPDV
HICHCGKECASYTDFKAHLSSHIHNHLPSQGHSSSHGPGHSKERKWKCSMCPQAFISPSK
LHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAHLESH
MVIHTGEKNLKCDYCEKLFMRRQDLKQHVLTHTQERQIKCPKCDKLFLRTNHLKKHLNSH
EGKRDYVCEKCSKAYLTKYHLTRHLKICKGPTSSLSAPEEEEEEDSEEELIDSVRTEDCR
INNGVYSTGDALSGHK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatgaacttgagtcctgtagggatggaccagctgacctcatcctctgtaagc
aatgccctgccggtctcagggagtcacttgggattggcagcgtcacccactcacaacgcc
ataccagcaccaggcttgcctgttgcaattccaaacttgggcccttccttgagttcattg
ccctctgctctgtctctgatgctcccaatgggtattggggatcgaggagtgatgtgtggt
ataccagagagaaactacactctacctccaccaccataccctcacctggagagcagctat
ttcagacacattctacctggtatcttgtcttacttggctgacagacctccacctcagtac
atccatcccaacactatgaatgttgatagcaatccagcattgtcagtctccagcaatccg
tcagccctagatccctaccagcccagtggaactgtagggctggaaccagggattgtctcc
atggactctcgcacagtgaacacacatggcgctcaaaatctgcatcctagtgacagccat
gaggtagcactggatactacaatcactatggagagtgtttcgagggtaaccagccccatc
tctacggatggaatgacagaggagcttacgatggatgatgtagctggtgatcattcgcag
atccccaacggctcccgcagccacgaacctttagctgtagacacagtagggagtaacttg
acgtcggacgctgtgggacacggcagtgtcattcccattcatggtagcactttggaactt
cctgttgtcatggagcccgaccacattgccgggcgggtgacaggaatgtcggacagcaca
ctaaatgactccattcatactgtggccatgagcaccaactccgtgagcgtggcgctctct
acctcacacaaccttgcttccttggactcggtagccttgcatgaagtgggcctcagcctt
gagccagtggcagtgtcttccataaatcaggaagtagccatggggccaagtcacgtggat
gtgtctgcagacaatcttgccttcgtaccatcctctctgcaaatggaagactccaactcg
aacaaggagaacatggcaaccttatttaccatatggtgcacactgtgtgacaaggcatat
ccatcagactgcccagaccacgggcccgtcacctttgtccccgacaccccgatagagagc
cgagccaggctttctctccctaagcagctcatcctccggcagtctatcatgggagccgaa
gcaggtgtgtgggcacgagaaaccattcctgtaaggacttgttttggacctttgatcggg
cagcagagccattctctggaggtggctgactggacagacaaagcagctagtcacatctgg
aagatctatcacaatggtgtcctggagttctgcatcattacaactgatgaaaatgaatgt
aactggatgatgtttgtacgcaaagccaggaaccgggaagagcagaatctggtagcttac
cctcacgatggaaaaatctacttctgcacctctcgggacatcccgcctgaacacgagctc
ctcttctattacagtcgggactatgcacgacagcttggtgtccctgaacatccggatgta
cacatctgccactgcggaaaggagtgcgcttcctacactgacttcaaggcccatctgagc
agccatattcacaaccacctccctagccaggggcacagcagcagccatgggccgggccac
agcaaggagaggaagtggaagtgctccatgtgcccccaggctttcatctccccttccaag
ctccacgtccacttcatggggcatatgggcatgaagccacacaagtgtgatttctgtagc
aaagctttcagtgatcctagcaacttacggacacacctcaagatccacacaggccagaag
aattaccgctgcacgctgtgtgacaagtccttcacccagaaggctcacctggaatcgcac
atggtcatccacaccggcgagaagaatctgaagtgcgattactgtgaaaagctcttcatg
cggcggcaggacctcaagcagcacgtgctcactcacacacaagaacggcagatcaaatgc
cccaagtgtgacaagctgtttttgaggacaaaccacctgaagaagcatctcaattcacat
gaaggaaagagggactatgtctgtgaaaaatgctccaaggcttatctaaccaaatatcac
ctcactcgccacttaaaaatatgtaaaggccccacatccagcctgtcagccccagaggag
gaagaggaggaggattcagaggaggaactaatagactcagtgaggactgaagactgtagg
attaacaatggagtgtattcaacaggtgatgccctctctggacacaaatga
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