Dryobates pubescens (Downy woodpecker): 104307327
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Entry
104307327 CDS
T08526
Symbol
PRPF3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104307327 (PRPF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpub03041
]
104307327 (PRPF3)
Spliceosome [BR:
dpub03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104307327 (PRPF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
104307327
NCBI-ProteinID:
XP_009906675
UniProt:
A0A093J7P4
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All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSLSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSNSDRSRKRELKDVFGDDSEVSKESSGVKKRRIPRFEEVE
DEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPAPQPKISSSSQSER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTYFDPRVSISPAQRQKRTFKFHEKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTKLALITPKKELKEGEIPEIEWWDSYIIPNGLDLKGGTSSKRDEYFGITNLVE
HPAQLSPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRIS
NLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKVKKLKEDVSQ
GVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML
HRIKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMARE
HFKKHGAEHYWDLALSESVLESTD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctccaagagggagctggatgagctgaagccatggatcgagaagacggtgaag
cgagtcctgggcttctcggagcccaccgtggtcaccgccgccctgaactgcgtggggaag
ggcatggacaagaagaaagcagctgaccacctcaagcccttcctggatgactccacgctg
cgcttcgtggacaagctcttcgaggcggtggaggaaggccgcagctccaggcactccaag
tccaacagcgaccgcagccgcaagcgagagctcaaggatgtgtttggtgatgactctgag
gtgtccaaggagtcctccggcgtcaagaagcgacggataccacgatttgaggaggtggag
gatgagccagaggtcattccaggcccaccttcagagagccctgggatgctcaccaagctg
cagatcaagcagatgatggaagcagctacccggcagattgaggagaggaaaaagcagctc
agcttcatcagccccccagccccacagcccaagatctcttcctcctcgcagtcggagcgg
ctgcccatcggcaacaccatccagccctcgcaggcggccaccttcatgaacgacgccatc
gagaaggccaggaaggctgcggagctgcaggcccgcatccaggcccagctggccctcaag
ccagggctgattggcaatgccaacatggtggggctggccaacctgcacgccatgggcatc
gcgccgccgaaagtggagctgaaggatcagacaaaacccacccccctgatcctggacgag
caaggccgaaccgtcgacgccaccggcaaggagattgagctgactcaccgcatgccaacc
ttgaaagccaacatcagagctgtgaagagagagcagttcaagcagcagctgaaagagaag
ccctcagaggacatggagtccaacacctactttgacccccgggtctccatcagcccagcc
cagcggcagaagcgaaccttcaagttccacgagaaaggcaaattcgagaagattgcccag
aggctgaggacaaaggctcaactagaaaagctgcaggctgagatctcccaggctgccagg
aagacagggatccacacctccaccaagttggctcttatcaccccgaaaaaagagctgaaa
gagggggagatccccgagatcgagtggtgggactcctacatcatcccaaacggcctcgac
ctgaaaggtggaacatcctccaagagggacgagtactttgggatcacaaacctcgtggag
cacccggcacagctcagcccaccagtggacagtgacacaccagtgaccctgggtgtttat
ttaaccaagaaagagcagaagaaattacggcgacagactcggagagaagcccagaaggag
ctgcaagagaaagtcaggctgggcctgatgccaccaccagagcccaaagtaagaatctcc
aacttgatgagagtgctgggcacagaagctgttcaagacccaaccaaggtggaagctcac
gtcagagcacagatggcgaagagacagaaagctcacgaagaggcaaacgctgccaggaag
ctcacagcagaacagcgaaaagccaagaaggttaaaaagctgaaagaagatgtttcacag
ggggttcacatagctgtgtacagggtcagaaacttgagcaatccagccaaaaaattcaaa
attgaggcaaatgctggccagctctacctgacaggcgtggtggtgctacacaaagatgtc
aacgtggtggtggtagaaggaggccccaaagcacagaagaaattcaaacgtctcatgctt
caccgaataaaatgggacgagcaaacatcgaacacaaagggagaggatgatgatgagtct
gacgaggagtccgttaagaaaacaaacaaatgctctctggtttgggagggcacagccaag
gaccgcagcttcggcgagatgaagttcaagcagtgccccacggagaacatggcacgggag
cactttaaaaagcacggtgcagagcactactgggacctggccctcagcgagtccgtgctg
gagtccacagactga
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