Dryobates pubescens (Downy woodpecker): 104307349
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Entry
104307349 CDS
T08526
Symbol
ZC3H12A
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104307349 (ZC3H12A)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104307349 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
104307349
NCBI-ProteinID:
XP_009906697
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MQLKVDFFRKLGYSSEEIHVVLQKLGLNADTNTVLGELVKHGPAERDNSEAPAEAPEAPL
VPRGGAGNKSPAPAPGVEEAESENLKPIVIDGSNVAMSHGNKEVFSCRGILLAVQWFWDR
GHKDITVFVPSWRKEQPRPDVLITDQYILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIV
KLAHESDGIVVSNDTYRDLQNERPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDN
FLRKKPVVPEHKKQQCPYGKKCTYGIKCKFYHPERINQPQRSLADELRANARLSPTRSTS
AKEEKKGKRGSQAELLCSMPTESNKSSLQKVSAERKSLTHKAKPSDVLLQVKGGCMSGSV
PPNSGSHRSSERYQQPHMDSLSYISQEHLDSGIGSLETQLSDMWPYRSPSHCDHSHADPV
AVCSCGRQRPLYAHSPSLEQNGLVSYKHAAHKSSSSGASFLQYSPEISHSGAPHSFSGYG
VPVHPANPGQYSLPGEYSAPAPHSREYWSEPYQLAAAAARPGSVRDPRAVQRAPGPAYGD
CGSQWAAPEQFAEERANVHVKLCGIFHPHLVDAVMSRFPRLLDPQRLAAEILTYKSQNPG
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaggtggacttcttccgcaagctgggctactcctcggaggagatccacgtc
gtgctgcagaagctgggcctgaatgccgacaccaacactgtgctgggggagctggtgaag
cacggcccggccgagcgggacaacagcgaagccccggcggaggccccggaggcgccgctg
gtcccgcggggtggagccggcaacaagagccccgcgcccgccccgggcgtcgaggaggcc
gagagcgagaacctgaagcccatcgtgatcgacggcagcaacgtggccatgagccatggc
aacaaagaggtcttctcctgccgagggatccttctggctgtgcagtggttttgggacagg
ggacacaaggatatcacggtctttgtgccatcttggaggaaggagcagccacgaccagat
gtgctaataacagatcagtacattctccgtgacctggagaagaagaaaatcctggtcttc
actccttccaggagggttgggggcaagcgtgtggtctgctacgacgataggttcattgtg
aagctggcacacgagtccgacggcatcgtggtgtccaacgatacctaccgggacctgcag
aacgagcggcccgagtggaagaagttcattgaggagcggctgctgatgtactcctttgtc
aatgacaagtttatgcctccagatgatcccttggggcgtcatggccccagcctggataac
ttcctgagaaagaaacctgtggtgccagaacacaagaaacagcagtgcccttatgggaag
aaatgcacttatggaattaagtgtaaattctaccaccctgaaaggatcaatcagccccag
cgctccttggctgatgaactccgagccaatgcaaggctgtctccaaccagaagtaccagt
gccaaggaggagaaaaagggcaaacgaggttcccaggcagagctcttgtgctccatgccc
acagagagcaataaaagctctttgcagaaggtctctgcagagaggaaaagcttgacccac
aaagcaaagcccagtgatgttctgcttcaggtcaaaggtggctgcatgtcaggaagcgtc
cctcccaacagtgggagccacaggtcctccgagaggtaccagcaacctcatatggactct
ctgtcttacatctcgcaggagcatcttgactcaggcattggatccctggagacccaactg
tctgatatgtggccttacagatctcccagtcactgtgatcattcccatgctgatccagta
gcagtctgcagctgtgggaggcagagaccactctacgcacattctcccagcttagagcaa
aacggtctggtctcctacaagcatgctgcccataaatcttcttcctctggtgctagcttc
ttgcagtacagccctgagatctctcactcgggagcacctcactctttctcaggctatgga
gtgcctgtgcacccagctaaccctgggcagtacagcctgcccggcgagtacagcgcccct
gccccccattctcgcgagtactggtcggagccgtaccagctggcggcagccgccgcgaga
cccggcagcgtccgcgacccccgagcggtgcagagagccccggggccggcctacggggac
tgcggctcccagtgggcagcgcccgagcagttcgcggaggagcgtgccaacgtgcacgtc
aagctctgcggcatcttccacccccacctggtggacgctgtcatgagtcgcttccctcgg
ctgctggacccccagaggctggctgcagagatcctcacctacaagtcccagaaccccggg
gtgtga
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