Dryobates pubescens (Downy woodpecker): 104307372
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Entry
104307372 CDS
T08526
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03082
ATP-dependent chromatin remodeling
dpub03083
Polycomb repressive complex
dpub04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104307372 (RBBP4)
03083 Polycomb repressive complex
104307372 (RBBP4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104307372 (RBBP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104307372 (RBBP4)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104307372 (RBBP4)
Histone modification proteins
HAT complexes
HATB complex
104307372 (RBBP4)
HDAC complexes
Sin3A-HDAC complex
104307372 (RBBP4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104307372 (RBBP4)
PRC2.2
104307372 (RBBP4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104307372 (RBBP4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
104307372 (RBBP4)
Chromatin remodeling factors
NuRD complex
104307372 (RBBP4)
NuRF complex
104307372 (RBBP4)
NuRF complex (fruit fly)
104307372 (RBBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
CAF1C_H4-bd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
104307372
NCBI-ProteinID:
XP_009906724
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MTHALEWPSLTAQWLPDITRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDA
SHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYT
KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK
VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE
VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS
SGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE
DNIMQVWQMAENIYNDEDPEGSVDPEGQGS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgctctggagtggcccagcctgactgctcagtggcttcctgatataaccaga
cctgaaggcaaagacttcagcattcacaggctagtgctggggactcacacttcagatgaa
caaaaccacctggtcatagccagtgtgcagttgcctaatgatgatgcacagtttgatgct
tcacactatgacagtgagaaaggagaatttggaggctttgggtcagttagtggaaaaatt
gagattgagatcaagatcaatcacgagggagaggtgaacagagctcgttacatgccacag
aacccctgcatcatcgctaccaagactccatccagtgatgtccttgtctttgactacacc
aaacacccttccaaaccagatccctctggagagtgcaaccctgacctgcggcttcgcggc
caccagaaggaaggttatggactctcgtggaaccccaacctgagtggccatctgcttagt
gcttctgatgatcataccatttgcctgtgggacatcagtgctgttccaaaggaaggcaaa
gtggtggatgccaagaccatcttcacaggacacacagcagtggtggaagatgtctcctgg
cacctgctccatgaatctctttttggctctgttgctgatgatcagaagctcatgatctgg
gatactcggtccaacaacacctccaagcccagccactcggtggatgcacacacagctgag
gtcaactgcctctccttcaacccctacagtgagttcatcctggcaacaggatcagctgat
aagactgttgctctctgggacttgaggaacctaaagctgaagttgcactcctttgaatca
cacaaagatgaaatatttcaggtgcagtggtctcctcacaacgaaaccatcctggcctcc
agcggcactgaccgcaggctaaacgtctgggacttgagtaaaattggagaggagcagtcc
cctgaagatgctgaggatggtcccccagagctgctgtttattcatggtggtcacactgcc
aagatctctgacttctcctggaaccccaacgagccctgggtaatttgttctgtatcagaa
gacaatatcatgcaagtctggcaaatggctgagaacatctacaacgatgaagaccctgaa
ggaagtgtggatccagagggtcaaggatcctag
DBGET
integrated database retrieval system