Dryobates pubescens (Downy woodpecker): 104307422
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Entry
104307422 CDS
T08526
Symbol
COL8A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
dpub
Dryobates pubescens (Downy woodpecker)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
104307422
NCBI-ProteinID:
XP_009906785
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MSAVISQGSAVLSTGVLTAGGAVGSRMLPDAAVLLVVVLGLRSAAGGGAAGYAQVKYMQP
MVKGPLGPPFREGKGQYLDMPPLLPMDLKGEPGPPGKPGPRGPPGPPGYPGKPGTGKPGM
HGQPGPAGPPGFSGIGKPGIPGLPGKAGMKGMPGAKGEPGMRGEQGPRGLPGPPGLPGPA
GISVNGKPGPQGGPGLPGFRGEPGPKGEPGPRGERGMKGENGVGKPGLPGPRGNGGPPGP
AGPPGPIGVGKPGLNGLPGAPGEKGDIGPPGGPGISGEPGPMGPRGPPGIDGIGVPGAAG
VPGIQGPIGPKGEPGIRGLPGLPGPTGYGKPGLPGLKGDRGQPGAQGAIGDKGEPGVDGE
PGEPGPAGIIGPPGPPGSMGLPGKHGLPGTKGDVGPSGPPGMXXXXXXXXXXGCAGKPGV
PGERGLPGSLGPPGPAGPKGEPGFIGLPGVPGLTGGPGPKGDGGIPGQPGLRGPSGIPGL
QGPAGPMGPQGIPGLKGEPGLPGVPGEGKTGEPGMAGPIGPPGMPGTPGLNGPPGPPGPP
GPPGAPGVLDETGIAGLHLPDGGVEGAVLDPVTGIFTCPISGIYYFAYHVHVKGTNVWVA
LYKNNVPATYTYDEYKKGYLDQASGSAVLELKENDQVWVQMPSDQANGLYSTEYIHSSFS
GFLLCPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagtgatcagccagggctccgcagtgctcagcacaggagttttgacagctgga
ggagcagtggggagcaggatgctgccggacgctgcggtgctgctggtggtggtgcttggc
cttcgctcggcggcgggaggcggcgcggcaggttacgcccaagtgaagtacatgcagccc
atggtgaagggacccctgggaccccccttccgtgaaggcaaagggcagtacctggacatg
ccaccgctgctgccgatggacctcaaaggggagccaggacccccaggaaagcccggccca
cgtggaccccccgggccccctggctatccagggaagccaggcacgggaaagccagggatg
cacggccagcctggccctgctgggccccccggcttctcgggcattgggaaacctggcatc
ccagggctccctggcaaggcgggtatgaaagggatgcctggagccaagggtgagcccggc
atgcgaggagagcaagggccaagaggactgcctggacccccagggctgccaggaccagct
ggcatctcagtcaatgggaagccaggaccccagggtggccctggcttgcctgggtttcgg
ggagagcctggcccaaagggagagccagggcctcgtggagagcgagggatgaagggtgag
aatggcgtggggaagccagggttaccggggccccgggggaacgggggccctcctggccct
gcagggccccccgggcccatcggcgttggcaaacctggcctcaacggcttgccaggagcg
ccaggggagaagggtgacattgggcctccaggtgggcctggcatcagtggggagcctggc
cccatggggccacggggccccccaggcattgatgggattggcgtgccaggtgctgcggga
gtgccagggatacagggccccataggaccaaagggagagcccgggatccgtggcctccct
ggtttgccaggtccaacaggctacgggaagccaggcttgcctggcctcaaaggagaccgc
gggcagccgggggcacaaggagccattggcgataagggggaacctggtgttgatggggag
ccaggtgagccaggccctgctggcatcattgggccaccaggcccaccagggtccatgggg
ctgccaggcaagcatgggctgcctggaaccaaaggggatgtggggccaagtgggcctcca
ggaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggctgtgcaggaaagccaggggtg
cccggagaaaggggcctgcctggctcgctgggacctcctggcccagcgggccccaaagga
gaaccaggcttcattggcctcccaggggtgccagggttaacgggtggcccggggccaaaa
ggggatggtgggatcccggggcagccaggactgaggggcccctctggcatcccaggcctg
caaggacctgcaggtcccatggggcctcaggggataccagggctgaaaggggagcccggg
ctccccggagttcccggtgaggggaaaaccggtgagcctggcatggctggacccattggc
ccaccgggaatgccgggaacgccagggctgaatgggccaccaggcccaccagggccgccc
gggccgccaggagcacccggggtgctggacgagacgggcatcgcggggctgcacctgccg
gacggaggcgtggaaggcgccgtgctggacccggtcaccggcatcttcacctgccccatc
tctggcatctactacttcgcctaccacgtgcacgtcaaagggaccaacgtctgggtggcg
ctctacaagaacaacgtgcctgccacctacacctacgacgagtacaaaaagggttacctg
gaccaggcctcgggcagtgccgtgcttgaactcaaggagaacgaccaagtctgggtacaa
atgccctcggaccaggccaacgggttgtactccacggaatacatccactcctccttctct
gggttcctgctttgccccacataa
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