Dryobates pubescens (Downy woodpecker): 104307438
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Entry
104307438 CDS
T08526
Symbol
COL9A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04510
Focal adhesion
dpub04512
ECM-receptor interaction
dpub04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104307438 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104307438 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104307438 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dpub00535
]
104307438 (COL9A2)
Proteoglycans [BR:
dpub00535
]
Extracellular matrix (ECM) proteoglycans
Others
104307438 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104307438
NCBI-ProteinID:
XP_009906800
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MASPWLQLWILLQASCLCLAQIRGPPGEPGPRGPPGPPGVPGADGIDGIKGDPGAPGPDG
PPGKPGIDGLTGAKGEPGASGGPGLKGQPGLPGPPGLPGPSLPGPPGLPGQVGLPGEIGA
LGPKGPPGHIQGLEGSADFLCPTSCPPGPKGPQGLQGLKGHRGRPGALGEPGRQGRQGPK
GDIGLSGEQGIPGPPGPQGPRGYPGTAGPKGETGPAGYKGMVGTIGAAGRPGKEGPKGPP
GDPGEKGDLGGRGIRGPQGDIGPKGENGLPGIDGKDGSPGIPGLKGSVGQPGHPGTPGHR
GQAGLPGQPGSKGGPGDKGEAGARGQPGGTGAPGQVGEPGPRGEQGPQGVPGLKGDRGER
GPVGPPGEQGRVGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPKGSTGDPGVHGLAGLK
GEKGEAGEPGPQGQKGGKLSWGAGRGSGAGWVGMGPAVGAGGDRSDLPCXGVPPLPXLQG
LEAGDQHIVDVVLKMLQEQLAEVAVSAKRAALGGAGAVGPPGPPGPPGPPGEQGPHGPMG
PRGVPGILGAAGQIGNVGPKGKRGEKGERGEAGRGHPGMPGPPGIPGLPGIPGHALDGKA
GERGLPGSPGEAGRPGLPGPAGLPGFCDPAACLAASAYAAARLPEPGAVKGPIY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccctggctccagctctggatcttgctgcaagcctcctgcctctgcctggcc
cagatcagagggccaccaggagagcctggcccacgagggccccccggtcccccaggagtg
ccaggagccgacggcatcgatggcatcaagggggatcctggagcccctggtccggatgga
cccccagggaagcctggcatcgatggcctgacaggagccaaaggggagccaggagccagc
ggtgggccaggacttaaaggccagcctggactcccagggccaccagggctccctggtcct
tccctgccaggaccacctgggctcccaggccaggttgggcttcctggagagattggagcg
ctggggcccaagggccccccaggacacatccaaggactggaaggcagtgctgacttcttg
tgccccaccagctgcccaccaggtcccaagggcccccagggactgcagggactgaaggga
cacagaggccgccctggtgccctcggggagcctggcaggcagggcaggcagggtcccaag
ggtgacattggcctgtctggagagcaaggcatcccaggccctccgggtccccagggcccg
aggggctatcctgggacggcaggacccaagggtgagacgggtcctgctggctacaagggg
atggttggcaccatcggagcagccgggcggccgggcaaggaagggcccaagggaccacct
ggggaccctggtgagaagggagacctgggtggccgtggcatcaggggtccccaaggagac
attggccccaagggggagaatggcctgccgggcatcgacggcaaggacggcagcccgggc
atccccggcctgaagggcagcgtggggcagcctggccacccgggcacaccaggacaccgg
ggccaagctggcttgccaggccagccaggaagcaaaggtggcccaggagacaagggtgaa
gcaggcgctcgggggcagcccggtggcaccggggcaccagggcaggttggtgagcctgga
cctcgtggtgagcagggacctcagggtgtccccgggctgaagggtgaccgaggggagcgt
ggccctgtgggccccccaggagagcagggaagagtgggaccaaagggcgagcagggtccc
ccaggaatcccaggaccccaaggcttgccaggagtcaaaggagacaagggctccccaggg
aaaactggccccaaaggcagcactggagaccctggtgtccatggcctggcagggctgaag
ggagagaagggtgaagcaggagagccagggccacaggggcagaagggtgggaagctgtcg
tggggtgcagggagaggctctggagcggggtgggtggggatggggcctgctgtgggtgca
ggtggggacaggagtgacctcccttgctgaggtgtgcctcctctccctnngctgcagggc
ctggaggctggggaccagcacatcgtcgacgtggtgctgaagatgctgcaagagcagctg
gctgaggtggctgtcagcgccaagagagctgccctgggtggagcgggtgccgtgggaccc
cctggaccgcccggccctccggggccacccggcgagcaaggcccacacggacccatgggc
ccccgaggtgtccctggcatcctgggtgctgctgggcagattggcaacgtaggacctaaa
gggaaacgaggtgagaagggggagagaggagaggctggacgtggccacccaggcatgcca
gggcccccagggatcccaggtctccctggcatccctgggcacgctctggacggcaaggct
ggcgagaggggcttgccaggctccccaggggaggctggccgcccgggcttgcccggtcct
gccggtttgccggggttctgtgacccagcagcctgcctggcggcctcggcgtacgccgcc
gcgcgcctgcccgagccgggggccgtcaaaggaccaatctactga
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