Dryobates pubescens (Downy woodpecker): 104307485
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Entry
104307485 CDS
T08526
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03013
Nucleocytoplasmic transport
dpub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104307485 (SRRM1)
03015 mRNA surveillance pathway
104307485 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104307485 (SRRM1)
03041 Spliceosome [BR:
dpub03041
]
104307485 (SRRM1)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104307485 (SRRM1)
Spliceosome [BR:
dpub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104307485 (SRRM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
104307485
NCBI-ProteinID:
XP_009906847
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MSSGFVCSLDPILLREEEAKLWTLLGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSK
VNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFM
GELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNR
EKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKELTPEP
EPSVKPKETVVQEATSNSDIPKAPKPEPPVPETKENSPERNSKKEREREKEKEKPRQRSP
TRSKSRSRSRSRSPSHSRPRRRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSP
VRRRRRSSASLSGSSSSSSSSRSRSPPTPKHKSTEKRESPSPAPKPRKAELSESEEDKGG
KLAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSP
SPRKHQKEASPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRSRSPSPRRYSPPIQ
RRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKPRSSPAKRRSPSLSSKHRK
GSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPPPPRRGASASPQRRQSPSPSTRP
IRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHPGPPSPARSRSPSANWS
PAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAA
AAVVAAPDTTSAQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgggtttgtctgcagcctggatcccatcctgcttcgggaggaggaagcaaag
ctctggaccctcttgggaacgagcgcagagcaggacaatcgcttcagcaacaagcagaag
aagctgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatgagcaaa
gtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatccttggcttc
gaagatgatgtagtaattgagtttatattcaaccagttggaagtgaagaacccagattcc
aaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggagttcatg
ggagagctgtggcctctgctattaagtgcacaggaaaacattgctggtattccaactgcc
tttctggagctgaagaaagaagaaatcaaacagcgacagatagagcaagagaaactggct
tctatgaagaaacaagatgaggacaaggagaagagagataaggaagacaaagacaacaga
gaaaaaagagacagatccaggagtccaagaaggcgcaagtcaaggtctccttcccctcgc
aggaggtcgtcgcccgtgcggagggagcggaagcgcagccactcgcgctccccccaccac
aggaccaagagccgcagcgccacccctgcgcccgagaagaaggagctgactcctgagcca
gagccctctgtgaagccaaaggagactgttgttcaagaggcaacttcaaacagtgatatc
ccaaaagctcctaagcctgaacctcctgtaccagagactaaggaaaattcaccagaacgt
aactcaaagaaggagagggagagggagaaggagaaggagaagcctcggcagaggtcccca
actcgctccaagtcccgctccaggtcccggtcccggtctccgtctcactctcgaccccga
cggcgtcacagatcacggtcaagaaggcgacccagcccccggcggcgaccatctccgcgc
agaaggagcccccccaggcgaatgcctcccccacccagacacagaagaagccgctccccc
gtcaggaggagaaggagatcgtcggcgtccttatctggcagcagctcctcctcctcctcc
tcgcgttcccggtcgccgccaacacccaaacacaagagtactgaaaaaagagaatctcct
tcaccagctccaaaaccaaggaaagcagagctgtctgagtcagaagaagacaaaggaggt
aaactggctgcagcagattccgttcaacagaggcgtcagtacagaaggcaaaaccagcag
tcttcatctgattctggctcttcatcctcatctgaagaggaaaggcctaaaagatccaac
gtgaagaacggggaggtggggaggcgccgccgccactctcactcccgcagcccctcgccg
tccccccggaagcaccagaaggaggcctcccctcgccgcaggaggaggagtccctccccg
cccccagcccggcgccgccgctccccctcgcctgcgccccctccccgccgccggcggtcg
ccctccttgccccgcagaagccgctccccctccccccggaggtactctccgcccatccag
cgccgctactctccctcgccgccgcccaagagacgaacggcctctcctcctcccccgccc
aagcgccgggcgtctccctctccgcagtccaagcgccgagtctcccactcgccgcctccc
aagccgaggagctcccccgccaagcgccgctccccctccctctcttccaagcaccggaag
ggctctccccccagcaggtccaaccgggaaactcgctccccgccacagaacaaaaggcat
tcaccttcaccacggcctagagcttcccatacctctgcaagcccacctccaccaccacca
cgaaggggagcttcagcttcaccccagaggaggcagtctccatcacccagcaccagaccc
atcaggagggtgtcgagaacgccagaacctaagaagacaaaggcctccacgccgagcccg
cgctccgcccggagagtgtcttcatcgcgctctgcttcaggatcccctgagccagcaccc
aaaaagcatccaggccctccctctcctgctcgctctcgctccccttctgccaactggtca
cctgcaaaaaaggctaaaagcccaactcagagcccatcacctgcaaggaattcagatcaa
gaagggggtggaaagaagaagaagaaaaagaaggataagaagcataaaaaggataagaag
cacaagaagcacaaaaagcataagaaggagaaggctgtggcggccgcggcggccgcggcc
gctgcagtggtggctgccccagacaccacctcagcacaggaagaccaggaggcagagaca
gaacccaagaaggagacagaaagtgaaccagaagacaacctggatgacctagagaaacac
ctgcgcgagaaggccctgaggtccatgaggaaggctcaagtgtcccccccctcctag
DBGET
integrated database retrieval system
