Dryobates pubescens (Downy woodpecker): 104307712
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Entry
104307712 CDS
T08526
Symbol
PARK2
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04120
Ubiquitin mediated proteolysis
dpub04137
Mitophagy - animal
dpub04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104307712 (PARK2)
04120 Ubiquitin mediated proteolysis
104307712 (PARK2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104307712 (PARK2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104307712 (PARK2)
04121 Ubiquitin system [BR:
dpub04121
]
104307712 (PARK2)
03029 Mitochondrial biogenesis [BR:
dpub03029
]
104307712 (PARK2)
Enzymes [BR:
dpub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
104307712 (PARK2)
Membrane trafficking [BR:
dpub04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
104307712 (PARK2)
Aggrephagy
Other aggrephagy associated proteins
104307712 (PARK2)
Xenophagy
Other xenophagy associated proteins
104307712 (PARK2)
Ubiquitin system [BR:
dpub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
104307712 (PARK2)
Mitochondrial biogenesis [BR:
dpub03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
104307712 (PARK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR_1
IBR
Motif
Other DBs
NCBI-GeneID:
104307712
NCBI-ProteinID:
XP_009907101
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
NCDLVQQSIVHIVQSPQKNSQTTDETEDNCAGGILKNLEREPESLTRIDLSTSILPSHSA
GLAVILDATKNSTTLSSEKSGAGSYNSFYVFCKNVCQAVKPGKLRVRCSLCKQGALTLAR
GPSCWDDVLIPNRIRGACQSQRCNGNTAEFYFKCGAHPTTDSETSVALNLITTNSRCITC
ITCTDVRSPVLVFQCVHRHVICLDCFHLYCVTMLNDRRFIHDPELGYSLPCVAGCPDSLI
KELHHFRILGEEQYDRYQRYGAEECVLQMGGVLCPTPGCGAGLLPEPGVRKIVCEPGNGI
GCGFVFCYECKEEYHEGECSSLLRAQGAKAQKGYLVDEQAAKQARWEEASRETIKKTTKP
CPNCNVPVEKNGGCMHMKCPRPQCRFEWCWNCGLEWNRTCMGDHWFE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
aactgtgacctggtgcagcagagtattgttcatattgttcagagtccacagaagaacagt
cagaccacagatgagacagaagataactgtgctgggggtattctaaaaaacttggaaaga
gaaccagaaagtctaacacgcatagatctcagtaccagcattctcccatcacactctgca
ggattggccgttattctggatgctacaaaaaacagcactactctttcctctgaaaaatca
ggtgcaggtagttacaacagtttttatgttttttgcaaaaatgtctgtcaagctgtgaaa
cctgggaaactgagggtccgctgcagtttgtgtaaacaaggagcactgacactggcaagg
ggtccatcttgctgggatgatgtgctgattcccaacagaataagaggtgcttgccagtcc
caaagatgcaatggaaacacagcggagttttactttaaatgtggagcacacccaaccact
gacagtgaaacatctgtggctctgaacctcattacaacaaacagtcgctgtatcacatgt
ataacatgcacagatgttaggagtcccgtgcttgtgttccagtgtgtgcaccgccacgtc
atctgcctagactgcttccatctgtactgtgtgactatgctgaatgaccgtcgcttcatc
catgatccagagcttggctattccctcccttgcgtagctggttgtccagactccttgatt
aaagagcttcatcacttcagaattctgggagaagaacagtatgaccgctaccagcgctat
ggggctgaagaatgcgtgctgcagatgggaggagtgctgtgtccaactcctggctgtgga
gcgggtttgcttcctgaaccaggagtgaggaaaattgtgtgtgaaccaggcaatggaata
ggctgtgggtttgttttctgctatgaatgtaaagaagaataccatgaaggggaatgcagc
tctcttctccgtgcacagggagccaaggcccagaagggatacctagttgatgaacaggca
gccaagcaagctcgatgggaagaggcatctagagaaaccatcaagaagacaactaagcca
tgcccaaactgcaatgttccagtagaaaaaaatggtggctgcatgcatatgaagtgtcct
cggcctcagtgcagatttgagtggtgctggaattgtggcctggagtggaacagaacttgt
atgggagatcattggtttgaatag
DBGET
integrated database retrieval system
