Dryobates pubescens (Downy woodpecker): 104307737
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Entry
104307737 CDS
T08526
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104307737 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104307737 (SPATA13)
Membrane trafficking [BR:
dpub04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104307737 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
104307737
NCBI-ProteinID:
XP_009907129
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MRFFTTPRKRANSSSDRPRSLVLMGNSSTWNALSSIRKMGSFKKLKSSVLQGIQTRECSD
ILNENGVGKPGSNGAMMRVESNRYSYSGPLHDFQNAVDGLASDCSDAEDSDESFLRNTHR
SRSIRRAYGAGRINLVDTDKAQSHHNCTRPTSPVIAEAKICEILVKDSENNRIIYRRSKS
SDNLNFLKKSSFKRKSTSNLTDLKVANDKQIPTRTVSVTSADSAKTSGNPERRSKRWKSP
IRAKDFDRVLKLVGNVADAAWKKDSPKATAPAPSDQSQRTRSNSRLHDDYSRRVSSSTDH
DRKRCTSPVSSPDSSLPGTPCLQSSSVAQDKEAEMNVAVAEDKSLRTSSGIPDSDSLSPT
LNDISPFPNEVFYSDSDEPKSTQQFPYEAEHPHVPVRPTTPKPQSPTAEKVKCNMNFQCP
NHHSTLSLSSSESDERVEVLGMKLGRNPVCFQDSVQTVYYDDGNEDSGISSHSQLSLNLA
SGAEEKKEEVVSDDHWKRSPSQDEEKADTQKIIPRRWGSGRRSRPRPLSDYGQMSVRSLS
IPEDSVAVESPTDCMDGENQPGLASFEPVTQSNTVGYHRGRKRRPISVIGGVNFYGSGPA
EEIEGLLTQPATRPPVPAHQVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTSNVAA
DGGTESSALVDDNGSEEDYSYEELCQATPRYLQPGGEQLAINELISDGSIVYAEALWDHV
TMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEEVPENCNSIQD
EEQDADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTT
AQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHP
SACIELSRLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTH
EHSDYNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIHS
GELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDEMEIVDTEDGRDKD
FNINIKNAFKIINRATEEIHLFCAKKQEDKKRWMEACESERRRVQEDKEMGMEISESQKK
QAMQNARKSRHGKMKGDYNGCPVPPPHQSLHPIHQRHITVPTSIPQQQVFALAEPKRKPS
LFWHTFNKLTPFKK
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttttcaccacccctcggaaacgggctaattccagctctgacaggcctcgttct
ctggttttgatgggcaactcatccacgtggaatgctttgtcttccatccgaaaaatggga
tctttcaagaagctgaaatcttcagttctccaaggaattcaaacaagggaatgctcagac
atcttaaatgagaatggtgtaggcaaacctggttcaaacggggccatgatgcgagtagag
tctaaccggtattcctattcggggcctctacacgatttccagaatgcagtggatggctta
gcttctgactgctccgacgcagaggatagtgatgagtctttcctgaggaatactcatcgc
tcacgcagcatcaggcgggcttatggtgctggccgcataaacttggtagacacggataaa
gctcagagtcatcacaactgtaccaggccaacatcacctgtcatcgccgaggcaaagatc
tgtgaaattttggtgaaagactctgaaaacaacaggatcatttaccggaggagcaaaagt
tcagataatttgaacttcctgaaaaaaagctccttcaaacggaagtccacctcaaacctc
actgacctcaaggttgcaaatgataaacaaataccaacacgaactgtgagtgttacttca
gctgactcagccaaaaccagtgggaatcctgagaggagatccaagcgatggaagagccct
atcagggcaaaggatttcgaccgagttttgaaacttgtcggtaatgttgcagatgctgca
tggaagaaggatagccctaaggccacagctcctgctcccagtgatcagtcccagagaaca
aggtcaaacagcagactgcatgatgactactcccgcagggtttccagcagcacggatcat
gacagaaagagatgcacctccccggtatctagtccagactcttccttgccaggaacacct
tgtctgcagagctcctcagttgctcaggataaagaggctgaaatgaatgtagccgttgct
gaagacaaaagcctcaggacgtcatcaggtatcccagactctgatagcttatcacccacg
ctgaatgacattagtccgtttcccaatgaagtgttttattcggactcagatgaaccaaaa
tctactcagcagtttccatatgaagctgaacaccctcatgttcctgtcagaccaactact
ccaaagcctcaaagtcccactgcagagaaggtaaagtgcaatatgaatttccagtgtcca
aaccatcacagcacattgtcactgagctcatcagagagcgacgagagagttgaagtactg
gggatgaagctgggcaggaatcctgtttgcttccaggactcagtgcaaactgtgtattat
gatgatggaaatgaagacagtggcataagcagccactctcaactgagcctcaatttagcc
tctggtgctgaagagaaaaaggaagaggttgtttctgatgaccactggaagaggtcccca
tcccaggatgaagaaaaggcagacacacaaaagatcatacccaggagatggggctctgga
agaagatctcgtcccagacctctctcagactacggtcaaatgtcagttagaagtttatct
ataccagaagattctgttgcggtggagtctccgacagactgcatggatggagaaaatcag
ccaggactggcttcctttgagcctgtgacacaaagcaacacagtaggctaccacagaggg
agaaaaagaagacccatctctgtaataggtggggtaaatttctatggaagcggtccggcg
gaagagatagaaggtctgctgacacaacctgcaacacggccacctgttccagcacaccag
gtacccccttacaaagctgtgtccgccaggttccggccgctcaccttttcacaaagtacc
cccattggcctggaccgggttggacgaaggcggcagatgagaacatcgaatgttgctgca
gatggtgggactgaatcttcagccttagtagatgataatggcagtgaggaagattacagt
tacgaggagctctgccaagccactcccaggtacctgcagcctggaggggaacagctagca
attaatgagctgatcagcgatggcagcattgtctatgcagaagctctctgggaccatgtg
actatggatgatcaagagctgggcttcaaagctggagatgtcattagagttctagaagct
tccaacaaagactggtggtggggaagaaatgaagacaaggaagcctggtttccagctagc
tttgtcaggctgcgagttaatcaggaagaagtgccagaaaattgtaatagtatccaggat
gaagaacaagatgcagatattagcaagcatcgtcagaaaatagctgaaaacaaggaccag
atgagaaccaatgttatacaggaaattatgaacacagaacgagtctatatcaagcacctc
aaggacatctgtgagggttatattcgtcagtgtcgcaaacacacaggaatgttcaccaca
gctcagctaagcaccatctttggaaatattgaagatatttacaagttccaaaggaagttt
ctgaaggatcttgagaaacagtacaacaaagaggaacctcacctaagtgaaatagggtca
tgttttcttcaacatcaagaaggctttgctatttattcagagtactgcaacaatcatccc
agtgcctgcattgagctttccagactaatgaagcagggcaaataccgtcacttctttgag
gcctgtcgcctgcttcagcagatgattgacattgccattgatggttttcttctcacgccc
gttcagaaaatctgcaagtaccctctgcagcttgcagaattgctcaaatacaccactcat
gagcacagtgattacaacaatataaaagctgcatatgaggctatgaagaatgtagcatgc
ctgatcaatgagcgaaaacgaagactagaaagcatagacaagattgcacgttggcaagtc
tctatcgtggactgggaggggccagatgtgttagcccgaagctcagaactgatccattca
ggagaactgaccaaaatatcaaagcaaggcaaaagccagcagaggactttcttccttttt
gaccatcagcttgtgttctgcaagaaggacttactgaggagggacatcttgtattataaa
gatcgtattgacatggatgagatggaaattgtggacactgaagatggcagagacaaggac
tttaacattaatatcaagaatgcttttaagataataaacagagcaacagaagagattcat
ttattctgtgcaaaaaagcaggaggataaaaagagatggatggaggcatgtgaaagtgaa
agaagaagagttcaggaagataaggagatgggaatggaaatctcagaaagccagaagaaa
caagccatgcagaatgcccgtaagtcaaggcatggaaaaatgaaaggtgactataatggg
tgccccgtgcctcctccacaccaaagcctccatcctattcatcagcgccacatcactgtg
cctaccagcatcccgcagcagcaggtttttgccttggcagaacccaagaggaagccatcc
ctcttctggcataccttcaacaaactcaccccctttaaaaagtga
DBGET
integrated database retrieval system
