Dryobates pubescens (Downy woodpecker): 104307780
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Entry
104307780 CDS
T08526
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpub03009
]
104307780 (DDX52)
Enzymes [BR:
dpub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104307780 (DDX52)
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
90S particles
Helicases
104307780 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104307780
NCBI-ProteinID:
XP_009907173
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MEAHDLFRRLGAGARFDVRRFGDDARRFGVIKRSGASVSLESLDFFGRKEEVPLGSGEED
WGLEGAGEQQEEDGVGKTKGEVAGKKKRTAESSEGKRKKKKTRESASMAELSGSNGIKWM
SSLEAKFADAKDKKPTAEKLERLRREKINRFRNKHRISVQGTDLPDPIATFDQLQKEYKV
HPKIMENIQAAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFCVPLLTHLKQPRN
KGFRALIIAPTRELASQTHRELVKLAEGTGFRIHMIHKAAAAAKKFGPKSSKKFDILVTT
PNRLIYLLKQDPPAVDLSSVEWLVVDESDKLFEDGKSGFREQLASIFLACTSPLVRRALF
SATFAHDVEEWCKLNLDSIVLVSVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFA
PPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQRDKVVHSFRAGKIWVLICSALL
ARGIDFKGVNMVINYDLPASAVEYIHRIGRTGRAGHRGRAVTFFTEDDKPLLRSIANVIQ
RAGCPVPDYIKHLPRLQSKQKKKFIKKPLTRESICTTPQCFLKKGKRKMKTAKENIKEKK
KVKEGKHGNKAETASQS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcatgatctgtttcggcgcttgggtgccggcgctcgcttcgatgtccggcgg
ttcggggacgatgcgaggcgattcggggtcataaaaaggagcggagccagcgtctcgctg
gagagcctcgacttcttcgggcgcaaggaggaagtccctttggggtccggcgaggaggac
tgggggctcgaaggggctggagagcagcaggaggaggatggagtggggaaaaccaaggga
gaggtggcaggaaagaaaaaaagaactgcagaaagcagtgaaggaaaaagaaaaaagaag
aagacacgagaatcagcatcaatggcagagctgtcaggaagcaatggcataaagtggatg
tcctctctggaagcaaaatttgcagatgcaaaagacaaaaagccgactgcagagaagctt
gaacgcttgaggagagaaaagataaaccgcttccgaaacaagcacagaatcagtgtgcag
gggacagatcttcctgaccccattgccacctttgaccagcttcaaaaggagtacaaagtc
caccctaaaatcatggagaacatccaagctgctggtttccaggtcccaacaccaatccag
atgcaggctattcctgtcatgctccatggtcgagagctcctcgcttcagctcctactggg
tctggaaaaactctggctttttgtgttcctctcttaactcatctgaaacaacccaggaac
aaaggattcagagctctgatcatagcacccacccgagagcttgctagccagacacacagg
gagctggtgaagctggctgaggggactggcttcaggatacacatgatccacaaggcagct
gcagcagctaagaagtttgggcccaagtcgtctaagaagtttgacattctagtgactact
cccaacagactcatctatttgctgaaacaagatcctccagcagtagatttgtccagtgtg
gagtggctggtggtggatgagtcagacaaactgtttgaagatgggaagtcaggcttccga
gagcagctggcctccatcttcctggcctgcacatcccctctggtgagaagagccctgttc
agtgccacctttgcccatgatgtagaggagtggtgtaaactcaaccttgacagcattgtt
ctggtgtctgttggagcaagaaactctgcagcagagacagtggaacaagagctgctgttt
gttggatctgagacaggaaagctaacagctatgagagagcttgtcaaaaagggttttgct
cctccagtccttgtctttgtccagtccattgagagggctaaagagcttttccatgaactg
atttatgaaggcatcaatgtggatgtcatccatgcagacagaacccagcagcagagagat
aaggtagtgcacagcttcagagctgggaagatctgggtgctcatctgctcagccctgctg
gctcgagggattgacttcaaaggagtgaacatggtcatcaattacgatttgccagcgagc
gccgtggaatacatccacaggataggtcgcacaggcagggcagggcacaggggcagagca
gtcaccttcttcacagaggatgataaacctttgctgcggagcatagccaacgtgatccag
cgagctggctgtcccgtgccagactacatcaagcacctgcccaggctgcaaagcaaacaa
aagaagaagttcattaagaaaccactgacaagagaatccatctgtaccaccccccagtgc
ttcttgaaaaagggcaaaaggaaaatgaaaactgcaaaggaaaatattaaggagaaaaag
aaagttaaagaaggtaaacatggcaacaaagcagagactgcttcacaaagctga
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