Dryobates pubescens (Downy woodpecker): 104307932
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Entry
104307932 CDS
T08526
Symbol
SH3TC1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104307932 (SH3TC1)
Membrane trafficking [BR:
dpub04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104307932 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_7
SH3_1
TPR_2
ARM_TT21_4th
SH3_2
TPR_1
SH3_9
Csd3_N
TPR_10
TPR_16
Motif
Other DBs
NCBI-GeneID:
104307932
NCBI-ProteinID:
XP_009907348
LinkDB
All DBs
Position
Unknown
AA seq
1328 aa
AA seq
DB search
MESVAAAGNTSVLNLNTIPGLEGNQESNLERKEMEQERCKSEWAPVEADAAISTVMDRVG
MDMLQEEIECSESEKCMNGSSRTPTNQAENFPTDISLKLLMVRRRSGCPDPRLQRQLRGQ
LRLLENDSREVIAVFSELSARLLSIHSDQDLIVVTFKTFEEIWKFLTYHSLGFINHCMEN
LFLDQSFWLSSQEEEEAGIEVCINEKSLDLMYRSLLAQEGAFFVACPDNLIRKVMATDNE
INTAEPGAFTECVTGGSVDGDTAVLSNASLEPLIPFHQWFLKAYSNPLNDICRXSNVSPX
YTAMGSCLAVMNYESTVSEELSFQEGDTIEILGYFLECMEWFLGRHVSTGQTGFVKTGHV
KLDLPRNEPQDLDFLEAEELSYFSEEKNLEEVIHLLEQTSLTDVCSVYRVDQLEEAEVQK
SPECDAPSSPSSTGSTSKNGKIEELLKNFRNLEVTQAGEPPTEGKDPAGSPNTEIFPPPE
DPCFHICQDDVQASDILESLILFLNRKEYDRNFKTLYDFSYPFLSSMFCGFAEEEELVSF
FRSAREAAKKAGMSWALARLCFLLGRLSVRKLKLSQARVYFEEALGAVAGGFSDLYLVIA
LYTNLTAIYLTQKNKEKCTPVFEKAASLLMAIPNYVCSADLESDLLKYALKRTILSQNKH
AEARACFLLAKHYSAHKQHEEALPFLERFQLLLNDLGLQSNLANHCYFKLAESYHVKCLP
HIVLSCIKVTSSQSSNTLMDSLQRIDLVIKNAPKIYSLRSLRQILPSQTAPYLMQALSSV
FSAEQQGLCSTLCLSLAELYSHHRQYAKAIAYMLKALDSAKPEETINHLVSLAWLYILHR
QCDVALAILNAVVDSTWSNPQQLGIAYNMLAIALRRTNNTKAAAESYYRALCLSEETGTT
HNQAIALANFGALCLHAAASKLAEHYFIRAVKLFSKLPIRDCGQDFIQVLLQLGCYYVGG
MQREKGRVYYEWAFLVAMETSHLESQLQAIKLLCQFYSTVAPDEAQCVIYNEYQLSLARK
MSNKVLEGQILETISQLYLSLGTERAYRSALEYTKRSLGIFIDLQKKEKEAYAWLRAGKI
YYVLRQNELVDLYIQVAQDAALHTGDPNLGMELSEAAGDIFFNGTWEKEKAVTFYRDGAL
PLAVQTGNKPTELRLCNKLVELLVNLKAYEESLEYARASLMLSIHLGNQLNERIAYHRLA
AIHHHLGHSELAEHFYLKALSLCSSPLEFEEETLYYVKVYSILGDIIFYDLKDPFDAAGY
YHLALAAAMDLGNKKAQLKIYTRLAIIYHNFLVDRELSLFFYQKARTFATELNVRRINLA
PDLCYKSL
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgtggcagcagcaggcaacacatccgtgctcaaccttaacaccatccctggt
ctagagggaaatcaggagagcaacttggagaggaaagaaatggagcaggaaaggtgcaag
tctgagtgggcacctgtggaggctgatgctgctatcagcactgtcatggatagagttggg
atggacatgctgcaagaggaaatagagtgttcagaaagtgagaaatgcatgaatggcagc
tcaaggacccctaccaaccaagcagagaattttccaactgatatctccttgaagttattg
atggtaagacgaaggagtggatgtcctgatcccagactgcagaggcagctcagagggcag
ctccgtctcctggagaacgacagcagggaggtgattgcagttttcagtgagctgtctgcc
aggctgctgtctattcacagtgaccaagatctaatagtggtgacatttaaaacttttgaa
gaaatctggaagtttctaacctaccactccctaggttttataaatcactgcatggaaaat
ctatttctggatcaatccttctggctctcttctcaagaggaggaagaagcaggcattgaa
gtctgtatcaatgaaaaatcattagatttgatgtacagaagcctgctagcacaggaaggg
gcattttttgtggcatgtcctgacaacctgataagaaaggtgatggctacagacaatgaa
ataaacactgctgagcctggagctttcactgaatgtgtgacaggtggatctgtggatggt
gacacagccgtgctgtctaatgcttctctggagccactgatcccttttcatcaatggttt
cttaaagcatattctaacccgttaaatgatatttgtaggtaaagtaatgtatctccttaa
tacacagcaatgggatcctgtctagctgtgatgaattatgaaagcactgtgtcagaagag
ctgagtttccaggaaggagacacaattgagatccttggctacttccttgaatgcatggaa
tggtttcttggaaggcatgtgtctactggccaaacaggttttgtaaagacaggtcatgtt
aagctggacttacctagaaatgaaccacaagacctggattttctggaagcagaagagctg
tcttatttttcagaagaaaagaacttggaggaagtgatacacttgttggaacaaacctcc
ctcactgatgtgtgctctgtgtaccgagtggaccaattagaagaggcagaagtgcagaaa
tctcctgaatgtgatgctccatcttcaccttctagcacaggatccactagcaagaatggc
aagatagaagaattgctgaagaacttcaggaatttggaggtcacccaggcaggagagcca
cctactgaaggaaaggatcctgctggctctccaaatacagaaatcttccctccacctgag
gatccttgcttccacatatgtcaagatgatgttcaagcatctgacatcttggagtcattg
atacttttcttgaataggaaagagtacgacaggaacttcaaaaccctgtatgatttctct
tacccatttctcagtagcatgttctgtgggtttgcagaagaggaggaactggtcagcttc
ttcagatcagcaagggaagcagcaaagaaggcaggcatgtcctgggcactagcgaggctg
tgctttctcttaggcaggctgagtgttagaaagctgaagctgtcccaggcccgggtgtat
ttcgaggaggcgctgggagcagtggctggagggttcagcgatctgtaccttgtcattgct
ctctacacaaacctcacagccatctacttgacccagaagaacaaagaaaaatgcactcct
gtgtttgagaaggctgcatctcttctcatggccattcccaactacgtttgcagtgctgac
ctggagtcagatcttctgaagtatgctctgaagaggacaatcctgagccagaacaaacac
gcagaggcaagggcatgctttctgctggcaaaacactacagtgcacacaagcagcatgaa
gaggcactgcccttcttggaaaggtttcaactcttgcttaatgacttgggtttacaaagc
aacttagcaaaccactgttacttcaaactagcagagtcctaccacgtgaagtgcttgcca
cacattgtgttaagctgcataaaagtcacctcttcccagagctcaaatactttaatggat
tccttgcaaaggattgatttagtcatcaaaaatgctcctaagatttacagtctgagaagt
ctcagacaaatactcccatcccaaactgcaccttacctcatgcaagcactttcctctgtg
ttcagtgctgagcagcaggggctgtgcagcaccctctgccttagtctagcagaactctac
agccaccacaggcagtatgcaaaggccattgcttacatgctgaaagcactggactctgct
aagccagaggaaactattaaccacttggtttcacttgcttggttatacatcctccacagg
cagtgtgatgtggctttagccattttaaatgctgttgtagactctacatggagcaatccc
caacaactaggcattgcttataacatgcttgctattgctttgagaagaacaaacaacacc
aaagcagctgctgagagctactacagagcactgtgcctctcggaagagactggcacaacc
cacaaccaagctatagccctggctaactttggggcactctgcctgcatgcagcagccagc
aagctggcagaacattatttcattagggcagtgaagctcttctccaagcttccaatcagg
gattgtggccaagactttatccaagtcctcctccagctgggatgttactatgttggtgga
atgcaaagagaaaaaggaagggtttattatgagtgggcttttttggttgcaatggagaca
agtcacctggaaagccagctacaagcaattaaactgctgtgccagttctacagtacagtt
gcacccgatgaggctcagtgtgtgatctacaatgagtatcaactctccttggctaggaag
atgtccaacaaagttctggagggacagatactggaaaccattagtcagctctatttgtct
ttaggaacagaaagggcttacagatcagctctggaatacaccaaaagaagccttggaata
tttatagatctccagaaaaaagagaaagaggcatatgcttggctccgggcagggaagatc
tactatgttctgaggcagaacgagctggtggatctgtacattcaggtggctcaggatgct
gctctgcacacaggagatcccaatttaggcatggagttgtctgaagctgctggagacata
tttttcaatggtacttgggagaaggagaaagcagtgactttctacagggatggggctctc
ccacttgctgtccagactggcaacaaacccactgagctcaggctgtgcaataaactggtg
gagctgctggtgaatctgaaggcttatgaggaaagtctggagtatgcaagagcatctctc
atgctcagtatacatttagggaatcagctaaatgagcgcatagcataccatcggctggct
gccatccaccatcacctggggcactctgagctagctgaacacttctacctgaaggccttg
tccctctgttcctctcctctggagtttgaggaggaaacactgtactatgtcaaggtgtac
tccatcctaggagacatcatattctatgacctcaaggacccctttgatgcagcaggctac
tatcatttggcactggctgctgccatggacctgggcaacaaaaaagctcagctgaagatc
tacacaaggcttgccataatctaccacaacttcctcgtggatcgggaactgtctctcttc
ttctaccagaaggcaaggacctttgcaacagagctgaatgtgaggagaataaatctagct
cctgatctgtgttacaagagcttgtaa
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