Dryobates pubescens (Downy woodpecker): 104307958
Help
Entry
104307958 CDS
T08526
Symbol
SHQ1
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpub03009
]
104307958 (SHQ1)
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
104307958 (SHQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
TLP-20
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
104307958
NCBI-ProteinID:
XP_009907380
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MITPAFELSQDPDFLTIIIKVPYARVSEFDVYFEGEDFKFYAKPYFLRLTLPGRIVEDGR
EKASYDTDKGTFTIQLPKEIPGQYFEGLDMLTSLLAPKKSRSAKPLVEEIAASADLSEEE
EEEFDWEIEQTPYNEIAESTLPPRYCYGFGNLRSGVFQRLQDELSDVIDIKDPDQTPVDE
RRRQRLAAEAAKFDPDHYLADFFEDEAIQHVLKYKPWWIDAHKKMIALQRESHQEHDAQT
LVVFSEEEREQMRKFTNKSYLLDKRSRHHVYLGLIDILLAYCYEICVNEGDKNVESSWNI
RKLSATLCWLESFTSIHDVLVSFGRRVLCYPLHRHFGLVTRAFNDTVMILQLGKAAVLKC
LLDIHKIFRENDPAYILNDLFITDYCIWIQKTKSKKLAALSDSLQKATLAKSHIGFELEE
LEAAAVLVQEEENVLKAAGTVSEQQLPSSESETSDSEESSSTSSSETEGSDSDEQESSTS
EDGKINSLQSTLQEERTAPLTDCNGLRQGTNTSATEVSDEKSRVSLPSTSVPGKLIEELE
KQMQTAIRLSEQPEGLATANCILKEQEENSVSEPVRCSKDTTEKGNFLEVSSKTSSLLFL
CSRDEDKD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgataactccagcttttgagctgagccaggatccggattttctcaccataataatcaaa
gtcccatatgctagagtttcagagtttgatgtctactttgaaggggaagattttaaattt
tatgctaagccatactttctcagattgacacttcctggaagaattgtggaagatggcaga
gaaaaagcatcttatgatacagacaaaggaactttcacaattcaattacctaaggagatt
cctggccagtatttcgagggactggacatgctgacatctcttttagcgccaaagaaatca
agatcagctaagcctctagtagaagagatagctgcctctgctgacttgtctgaggaggag
gaagaagaatttgactgggaaatagagcagaccccttacaatgaaattgcagaaagcact
ctaccaccacggtactgttacggatttgggaatttgcggtcaggggtgttccagcggctg
caggatgaactcagtgatgttattgacattaaggatccagaccaaactcctgtagatgaa
cgtaggaggcaacgcctggcagctgaggctgccaagtttgaccctgaccattacctagct
gatttttttgaagatgaagctattcagcatgttttaaagtacaaaccatggtggattgat
gctcataaaaaaatgatagccttgcagagagaaagtcatcaggaacatgatgctcaaaca
ctcgttgtcttctctgaggaagagagagagcagatgaggaagttcacaaataaatcttat
cttctggataaaagaagccgtcatcatgtatatcttggtttaattgatatcctgctggca
tattgctatgaaatctgtgtcaatgaaggagacaagaatgttgaatcatcttggaacatc
aggaaactgagtgcaacgttgtgctggctggagagtttcactagtattcatgatgtcctg
gtatcttttgggagaagagtgctatgctatcccctacacagacattttggactagtgaca
cgtgccttcaatgatacagtcatgatactgcaactaggaaaagctgcggttttgaagtgc
ctgctggacattcacaagatttttagggagaatgacccagcctacatccttaatgatctc
ttcattacagactactgcatctggattcaaaaaaccaagtcaaaaaagttggctgcactc
tctgactccttgcagaaagccacacttgctaagtcccacataggatttgaactggaagag
ctggaagcagcagcagtgctggtacaagaggaggagaatgtgttaaaagctgctggcaca
gtttctgagcaacagctgccttcctctgagtcggagacaagtgactctgaagaatctagc
agtacttcatcatctgagacagaaggctctgattcagatgagcaagagtcctcaaccagt
gaagatgggaaaataaattctttacaaagcacgcttcaagaggagaggacagctccactt
actgactgtaatggattaaggcagggcacaaacacttcggcgactgaagttagtgatgaa
aaatcaagggtttctttgccttctacatctgttcctgggaaattgatagaagaattagaa
aagcaaatgcagactgcaattagactttcagaacagcctgaaggactggctactgcaaac
tgcattttaaaggaacaagaagaaaactctgtatctgaacctgtcagatgctcaaaagat
actactgagaagggaaatttcttggaggtgtcttcaaagacgagctcattgctttttctc
tgcagcagagatgaagacaaagactga
DBGET
integrated database retrieval system