Dryobates pubescens (Downy woodpecker): 104308006
Help
Entry
104308006 CDS
T08526
Symbol
SMG7
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104308006 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104308006 (SMG7)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104308006 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
104308006 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
104308006
NCBI-ProteinID:
XP_009907430
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKN
RANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSA
IVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS
KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHG
HVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQH
SYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVF
QEAVVDERRYIWPWLISLLNSFQPHEEDLSSNNATPLPEEFELQGFLALRPSFRNLDFSK
GHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPS
EAKESLSSQETPIAEPLSTDGSPGLKSVLSSGRSLNNNCDTGEKPMVTFKENIKPREMNR
EWPSVEVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPT
YVVPPPVAFPMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGP
MTQGPQQTPPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAVQGLGKSPPHHS
GFQQYPQTDSSKQLWNPPQVQGSLGKIMPVKQPYYLHAQDPLKLFEQSLQPPVMQQQPLE
KKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSSMDRRGKRQGVFRPEQDAV
SRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLL
EKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVTPSVAHQETSLY
SLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNR
DRRVADRWKTDKPAMGGFGLDYLPATSSSSESSWHQSSTPSGTWAAQGPPAMEDSSAVLM
ESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcgaagctgggtccagcagaagtctggacatccagacaggctctacaggac
ttatatcagaaaatgctagtgaccgatttggaatatgctttagataaaaaggtggagcag
gacctttggaaccatgcctttaaaaaccagatcacgacgctgcagggtcaggcgaaaaat
agagcaaatccaaatcgaagcgaagttcaggcgaacctctctctgttcttagaggcagct
agtggcttctacacacagttattacaggaattgtgcacagtttttaatgttgacttgcca
tgtcgtgtgaagtcttcccaactgggaatcattagcaataaacagacgcacaccagcgcc
atagtgaagccgcagtctagctcctgctcatacatctgccagcactgccttgtccatctt
ggagatattgctcgctacaggaatcagaccagccaggcagagtcttactacagacacgca
gctcagcttgtcccttctaatggtcagccttataatcagttggctattctagcttcctcc
aaaggagaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcct
ttcccagctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgat
gaggtgaagactcgatggagcgtgtctgacttcatcaaggcattcattaaattccatggc
catgtgtacctgagtaagagcttggagaagctgagccctcttcgagaaaagctggaggaa
cagttcaagaggttgttattccagaaggccttcaattctcagcagttagtccatattact
gttatcaatctgttccaactgcatcacctgcgagacttcagcaacgaaacagagcagcac
agctacagccaggatgagcagctctgctggacacaattattggctctcttcatgtccttt
cttggagttctgtgcaagtgtcctttacaaaatgactaccaggaggactctggggctgca
tatcctcttccagctgtgaaagtttcaatggactggctgaaacttcggcccagtgttttc
caggaggcagtggtggatgaaagacggtacatatggccctggctgatttcgcttctaaac
agcttccagcctcacgaagaagatctctccagtaacaatgcaaccccccttccagaagaa
tttgagttgcaaggattcttagctctgaggccctcattcaggaacttggatttttccaaa
ggccaccaggcaattacaggggataaggaaggacagcagcgtcggatccgacagcagcgt
ctgatcttcacagggaagtggattgctgataaccagccgaggttgattcagtgtgaaaat
gaggtaggaaagctgttatttttgacagaaatcccagagctattgctagaggatcctagt
gaagccaaagagagtctcagctcacaggaaacacccattgcagagccgctatctacagat
ggaagccctggactcaaatcagttctgtcctctggcagaagcctgaacaacaactgtgac
acaggagaaaaaccaatggtcacattcaaagagaacatcaagccccgggagatgaaccga
gaatggccctctgtggaagtgaaatcccagacagaaatgaggaagactccggtgtctgaa
gccaggaaaacccctgtaactcagactccaagtcaagccagcagttctcagttcatcccc
attcaccacccaggagccttccctccccttcctagccggccagggtttccacctccaaca
tacgtcgtcccccctcctgtggctttccccatgagcaccgggtacaccttcccgggtggt
gtttctgtcccaggaaccttcctccagcccacagctcactcgcctgcaggaaaccaggtg
caaggtgggaaacagtcccacattccttacagccagcaacggccctctggaccagggcca
atgacccagggacctcagcaaacaccacctccttcccagcaacccctctcatctttacca
gctcaggcaacagcacagtccgcaagccagttacaggtccaagctctggcccagcagcag
cagcaacagtcccctacaaaagctgtgcagggcctggggaagagcccaccacaccactct
ggattccagcagtatcctcagacagattcgtccaagcagctctggaacccacctcaagtc
caaggctccctggggaagatcatgcctgtaaagcagccctattacctgcacgcccaggac
cctctcaaattatttgaacagtcattgcagcctcctgtgatgcaacagcaacctctggag
aaaaaaatgaagcctttcccaatggagccatataaccagaacccctcagaagtcaaagtg
ccagaatattactgggactcttcctatggcatggctgacaatagggtgatggcacagcag
tctagcatggaccgcaggggaaaacggcaaggagtcttccgcccagagcaggatgctgtc
tccaggatgacctttgaggaccccaagagctcccctctgcttcctccggacctgttaaag
agtctggctgccttggaggaggaggaagagctgattttctctaatcctcctgatctttac
ccagctctgctggggcctctcgcctctcttcctggacgaagtctctttaagtccctgctg
gaaaaaccatcagaattgatgtctcagtcatcttctttcctgtcccttagtggcttttct
cttaatcaggaaagatacccgaacaacagcatgttcaatgaggtgtatgggaagaacatg
aataccagcacaaaaacagaagtcaccccttcagttgcccaccaggagacttcactctat
tctctctttgaagggactccgtggtctccatcccttccagccagctcagatcattcaaca
ccagccagccagtctcctcactcctccaaccccagcagcttgccaagctcccctccaacc
cataatcacaattctgttcccttctccaattttggacctattgggactccagacaacaga
gacaggagagttgcagaccgctggaaaacagataagccagcaatgggagggtttggtctg
gactatctcccagcaacatcctcgtcttcagagagcagctggcaccagtccagcactccc
agtggcacctgggcagcccaaggccctcctgctatggaagactcctcagctgtgcttatg
gagagcctgaagtccatctggtccagttccatgatgcaccctggaccctcagccctggag
cagctgttaatgcagcagaagcagaagcagcaacgcggacaaggcaccatgaacccgccg
cattga
DBGET
integrated database retrieval system