Dryobates pubescens (Downy woodpecker): 104308272 Help Entry 104308272         CDS       T08526                                  Symbol RIF1 Name (RefSeq) telomere-associated protein RIF1   KO K11138   telomere-associated protein RIF1 Organism dpub  Dryobates pubescens (Downy woodpecker) Brite KEGG Orthology (KO) [BR:dpub00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dpub03032]     104308272 (RIF1) DNA replication proteins [BR:dpub03032]  Eukaryotic type   DNA Replication Termination Factors    Other termination factors     104308272 (RIF1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rif1_N Motif Other DBs NCBI-GeneID:  104308272 NCBI-ProteinID:  XP_009907745 LinkDB All DBs Position Unknown AA seq 2359 aa AA seqDB search MLIHRLTGEESKQFTANVRKHFPRLCKVFKAHISNQNSELNNAALQALGFCVFNSSIVSE LSATEIRALLSEVTSVAVKASDKNTRTRALWVISKQTFPSEIVQKEVSNIISTLETIFTK GDLQSSVVEYEALNVIIRLVEQTPAQMGEEAVRWAKLIIPLVVHSTHKVQLRGATALEMG MPLLLQKQQEVAAVTEHLMTTKLISELQKLFSTKNETYVLKLWPLFVKLLGKALHRSGSF INSLLQLEELGFRSGSPVVKKIAFIAWKSLIDNFALNPDILCSAKRLKLLMQPLSSIHVR TEALALTKLEVWWYLLMRLGPQLPANFEQVCVPLIQSTLSLDSSAAVLQGTPSRVPANQS LAPATPAQKSGPYSFATPATPRMNLNSSTAGLVAIPSIQLLGIEMLLHFLMGPEVLDFAK QNKVVLSLEPLQNPLISTPSFFCKHASTFINAVQDGFIAIGKEVPDCMLNVIWKDINGYV KTAIESGNKKEKQGSEILTLLLQALKNIVRSNSLPVQKILSLIDITVKELPPKVLGSPAY QIADMDLLNGTPALFLLQLPFHNNLLECCVTEERFFVILETLVGYVLSGPASPLAFSESV ICIINQSAKQVENKEHLWRMWSIVVNPLTEWINRTNEVNQGDALEHNFNAVYSALLLPVL HILPVQEFPQPTMKSLLRTWSDLYRAFARCAALVATAEENLCCEELCAKIIAGLEGETPV MLSMMDGLTHILSVMVDCINFAPYATKYQPKTRAPQTSTDWAKKKKEPLGKLASLFKLLV MLLSSFHMLSSKEPCSDTLVSVGPAIFALLHSIISHVSLPSVIGSMFAVLSKPLAVFYEK TMLPDVSKVYSHLNTKLEKLLAEIMLCLQSHCTGSYDAELLEQLCPLLCVTFQHKSKQIR NQAAHFWNATFAKAAALTYPEELKAVLSQAKKKMPLLLPGFENIEMAEDCSSPFSDVVED SQLDAKISGMEVKLGQKRDSVLGQTSEIGNEVKDKCNNMQATPAKLKLDFSSSKPRSEVL LEEEASADFVFIPPETKTRVLTEHQKEVLRSKRSVIXXXYNNLDSSQDTTLFSQYTQSQE DSLEKSSLMEDAKEVVEDKPQESSSSKRKEDSKEETDEMVVEQPSAGEGLETSSVEAAPE EPSEGNDNPANVSSSSASSDVVSGTPQPASRRQSFITLEKFGSSESRPFSPSPLNSVSGT SASASGAGKKESTSSKTAAGPEKAGDDDKKPEQVFTAIRKLTRRQSKMEQEGQKQSQLSA RLEQESLASSSVENSPGLLSAEDVEQVLLAQSQALRSSDLDIKKAEDVVGEIERERLADM DAKENTPPGTAVSSEQVTAEDSQVPPASPSQKVLRRSLRRRSEAAESAAGSQEAEDGHQK RSRHKDSEKSAQKKVPQAKDDGSQKQKVGSGKSTENTSKPESSLGERAAAEDLSSKEPPA SRGLEEVSRSARRPEENLKADTTEGPDSSEGAEGQTQPKRPRYHTRRASQGLLSSIENSE AEGSETKQESAKRRKQAKGKSRDDPPEDKLKEQQPGSCSQELSSQGGETKGLEAENRAEL SHEASRDAAPTAEPGELPTQVTPADSSRAVAPASSEASPDLQSPSGEQSRSGALAELHAA PPASGGQGLRAAEETSQPEKQPPTEDSASSGKVPPSQTPEGHLKRSKRLKRLKNCSCCLK KVKEEAVPFTRSPKEVTHEEKEPQTTPVQTPASTPELSGSSQSDESLPVAPCAMSTPLHP PKQLRALNVEGEGSSAENLQGNKVMVEENLDAECLEGEIILSLVEIQGPFGQTDQCLSEP ASDEPGDSRLAAGDQSEEPAAAENEDTSQSRQLEETSEVLTVSKPEGKQLKELESHQDGE KAESKAGETGGVQDAETEGLGETEATVSEDVALDKENVAEGRGVGSPQKPADVSSVVSES PNGVQARCVWSPSASPSTGILKRGVKRSQDDDSLSPANKSRRVSFANPIYQEGLADDIDR RSPVVRSHSSPSSRSLKVLSNGQPKRITTPTKGFLPLESRKSKLKSSKKCLIREMAMESP PSRKECMYPALVGCKTPVSVILPQITTSLCARGMVQVIRARNIRTVGDLSNLTAAEIENL PILSPKVYNVRKALRGYHEHKVKSRGLEEIAVLEDVEKPSEDAEKPKDTEPSENVEKTED FEKPSEDADKPQDFEKPSEDVEKPSEDAEKPQDFEKPSEHAVKSEDMEEPSEDAEKPQDL EKPSEDVEKPQDFEKPSEDVVKSEAMEEPSEDVEMSEHMEHPSEDAEEPEDHEEEKPLLV EEQHSTALVEAVAPAPAAPAPADLLSQMEALAAQLSSAELLQCYSGSQLFEMQAKLLAMT NCIMRNLQARWQQPPPEGS NT seq 7080 nt NT seq  +upstreamnt  +downstreamnt atgcttatacatcgcttgactggcgaggaaagcaaacagttcactgcgaacgtcaggaaa cactttcctcggctttgcaaggtgttcaaggcacatatttctaatcaaaactcagagctg aataatgcagcattgcaggcactgggattctgtgtttttaattcaagtattgtatctgaa ttatcagcgactgaaatccgagccctgctgtcggaggtgaccagcgtcgccgtcaaagct tcagacaaaaacactcgcactcgggcactttgggtgatctctaagcagacatttccttct gagattgttcaaaaggaggtgtccaatattatttctaccttggaaacaatctttactaaa ggggatttgcagtcttcagtggttgaatacgaagcactgaatgttattatacgcttagtg gagcaaactccagcccagatgggagaagaagctgtgaggtgggcaaaactgatcattccc ctggttgtccattccactcacaaggtgcagttgagaggtgccactgccctggagatgggc atgcccctgctgctccagaaacagcaggaggtggctgctgtcactgagcacctgatgacc acaaaattgatttcagagcttcagaagctgttctctacgaaaaacgaaacttatgtcttg aaattgtggcctctctttgtcaaactgcttggaaaggctctgcaccgtagcggcagtttc atcaactccttgctgcagctggaggagctgggcttccgtagtggctcaccagtggtgaag aaaatagccttcattgcatggaagagcctaatagataattttgctctgaatccagatatc ctgtgcagtgctaaaaggctgaaactgctcatgcaaccactgagttccatccatgtgaga acagaggcattggcgctgaccaaactggaagtctggtggtacttactcatgaggctgggg cctcagctgcctgccaactttgaacaggtttgtgtgccattaatccaaagtactctaagt ctagattcttctgctgctgtgctgcaaggaactccctcacgtgtaccagccaaccaaagc ttagctccagcaacccctgcacagaaatcaggtccttactcctttgcaacccctgccaca ccaaggatgaacttgaattccagcacagcaggactggtggccattccttccatccagctg ctgggaattgaaatgctgcttcacttcctgatggggccagaagttttagattttgctaag caaaacaaagttgtgctcagtttagagcctctccagaatccactgatcagtaccccttct tttttttgtaagcatgccagcacctttataaatgcagttcaggatgggtttattgccata ggaaaagaagtccctgattgtatgctgaatgttatatggaaggacatcaatggctatgtg aaaacagctattgaatcaggaaataagaaagaaaagcaaggctctgaaatactgactttg ttgctccaagccttaaagaacattgttagatccaattctcttcctgtgcagaaaatattg tccctcattgatattactgttaaggagctgccaccaaaagtgttgggatcaccagcttat cagattgctgatatggatcttttaaatggaacaccagctttgttcttactccagctgcct ttccataataacctcttggaatgctgtgtcacagaagagaggttctttgtcattctggaa acacttgtgggttatgttctgtctgggcctgcatctcccctggctttcagtgagtctgtg atctgcattattaaccagagtgcaaagcaagtggaaaataaggagcatctctggagaatg tggagtattgttgttaatcctctcacagaatggatcaataggactaatgaagtaaaccag ggtgatgcactggagcacaacttcaatgctgtttatagtgccttgttgctaccggtgttg cacatcctccccgttcaggaattcccacagccaacgatgaaatccttgctgcgcacctgg tcggacctgtacagagcctttgctcgctgtgctgctttagttgcaacagcagaagaaaac ctctgctgtgaagagctctgtgccaaaataatagctgggctagaaggtgaaactccagta atgttgtcaatgatggatggtctcacccatattctgtcagttatggttgactgcatcaac tttgcaccatatgctactaaatatcagccaaaaaccagagctccacagacctctacagac tgggccaagaagaagaaggagccccttggcaagcttgcctctctgtttaaactcctggtg atgttactgagctctttccacatgctcagttccaaggagccctgctcagacacattggtt tctgttggccctgcgatttttgccctcctgcacagcatcatcagccacgtttccttgcct tcagtgattgggagcatgtttgcagtcttgtccaagcccctggcagtcttttatgagaag accatgcttcctgatgtctctaaagtctacagtcatcttaacaccaagctggaaaagctg ctggctgagataatgctgtgcctgcagtcccactgcaccggctcctacgacgctgagctg ctggagcagctctgccccttgctctgtgtcaccttccagcacaagagcaagcagatccgt aaccaggcagcccacttctggaatgccacctttgccaaggctgcagcactgacctaccct gaggagctgaaagctgtgttgagccaagccaaaaagaaaatgcccctcttgctgcctgga tttgagaacattgagatggctgaagactgcagcagcccattctctgatgtggtggaagac tcccagctggatgcaaagatcagtggaatggaggtaaagctgggtcagaaacgagactca gtgttggggcagaccagtgaaataggaaatgaagtgaaagacaaatgcaataacatgcaa gcaacacctgcaaagttaaaactagacttttcatcttcaaagcctagaagtgaggtgctt ctggaagaggaggcatctgctgatttcgtgttcattcctccagaaacaaaaacaagagta ctgacagagcatcagaaggaagtgcttaggtcaaagaggtctgtgattnnnnnnnnntac aacaatttggacagctcacaggacacgaccttgttctctcagtacactcaaagccaggaa gattctttggagaagtcctctttaatggaagatgcaaaagaagttgttgaagacaagcct caggagagctcaagttcaaagaggaaggaagactccaaagaggaaacagatgaaatggtt gtggagcagccatcagctggagaggggttagagaccagcagtgtggaagcagctccagag gagccctcagaaggcaatgacaaccccgccaatgtcagcagcagctcggcttccagcgac gtcgtctctggcacgccgcagcccgcgagccgccggcagtccttcattaccctggagaag tttgggagctcggagagcaggccttttagcccatccccattgaacagcgtgtcagggacc tctgcaagtgcttctggggcaggtaaaaaggaaagcaccagcagcaagaccgctgctggg ccagagaaagccggagacgacgacaaaaagcctgagcaggtgttcactgccatacggaag ctgacgcggcggcagagcaagatggagcaagaaggacagaagcagtcccagctctcagcc aggttagagcaagagtctctggcttccagcagtgtggaaaacagccctggactgctttct gcagaagacgtggagcaggttctcctcgctcagtcccaagctctccgctcttcagatctg gacattaaaaaagctgaagatgtcgtaggagaaatagaaagggaaaggttagcagatatg gatgctaaagaaaacacacctccaggcaccgctgtgtcctctgagcaggtgacagctgag gacagtcaggttcctcctgcctctcctagccagaaggtactaaggcgtagcttgcgacgg cggtcggaagctgcggagagcgcggccggtagtcaggaggcagaagatggccaccaaaag agaagcagacacaaagacagtgaaaaatctgcccagaagaaggtgccacaggctaaagat gacggctcccaaaagcagaaggtgggttctgggaagagcacagaaaacacaagtaaacca gaaagcagcttgggcgagagagcggccgcagaggacttgagctcgaaggagcctcctgct tcgaggggtctggaggaagtgagcagaagtgcaaggaggccagaggagaacttgaaggct gacaccacggaggggcctgacagcagcgagggcgcagaagggcagacgcagccgaaacgg ccacggtaccacaccaggagagcttcccaaggattgctttccagcattgaaaattcagag gctgagggctctgagaccaagcaggaaagcgcaaagaggaggaaacaggccaaggggaaa agcagagatgatcctcccgaagacaagttgaaagagcagcagccaggaagctgtagccag gagctgtcctcccaaggaggtgaaactaagggcctggaggcagagaatcgagctgagctg agccatgaagccagcagagatgctgcaccaacagctgagcccggtgagctgccaacccag gtcaccccagcagacagcagcagagctgtggcacctgccagctctgaggcgtcgcctgac ctgcagagcccaagcggggagcaaagcaggagcggcgcgctggcggaactgcacgctgct ccacctgcatctggtggtcagggtttgagagcagcagaggagaccagccagcctgagaag cagccacccacagaagactctgcttcaagtggcaaagttcctccttcacaaacacctgag gggcacctcaagagaagcaaaaggctgaaaaggttaaagaactgtagctgctgccttaaa aaggtaaaggaggaagcggtgcccttcaccagatccccaaaagaggtcactcatgaagag aaggagccccaaaccaccccagttcagacgcctgcgagcaccccagagctgtctggtagt tctcagtctgatgagagcttgcccgtggcaccttgtgcaatgagcactccgctgcatcct cccaagcagctccgtgccttgaacgtggaaggagagggatcctctgcagagaacctgcaa gggaacaaggtcatggtggaggagaatctggatgcagagtgccttgaaggtgaaatcatc ctctccttagtggaaatacaaggaccctttggtcagactgaccagtgtctgtctgaacct gcttcggatgagcctggtgatagccgtctggcagcaggggaccaaagtgaagagccagca gctgcagaaaatgaagacacaagtcagagtagacaactggaggagacctctgaggtgctg actgttagcaaacctgagggcaaacagctgaaggagctagaaagccatcaggatggtgaa aaagctgagagcaaggcaggggaaaccggtggtgtccaagatgcagagacagagggactg ggggaaactgaagccacagtgtctgaagatgtggccttagacaaagaaaatgtagcagaa ggcagaggtgtggggtcccctcagaagccagcagatgtcagctctgtggtcagtgagagc cccaatggtgtgcaggcacgctgcgtgtggtctccttcggcttctccatccacgggcatt ttaaagaggggtgtcaagaggagccaggatgatgactccctctcacctgctaataagagc cgccgtgtctccttcgcaaaccccatttaccaggaggggctggcagacgacatcgacagg agaagccctgtggtcagatcccattcctcaccctcctcacgaagccttaaagtcttgtcc aatggtcagcccaagcgtatcaccactccaaccaaaggatttctgcccctagaatcacgt aaatctaagctgaaaagctccaagaagtgtttaatcagggagatggccatggagtcgccc ccttcccggaaggaatgcatgtaccccgccttggttggctgcaagaccccagtcagtgtc attctacctcagatcacaacaagcctctgtgccaggggcatggtgcaggtcattcgagcg cggaacatcaggaccgtgggggacctgagcaacctgacggcggcggagatcgagaacctt cccatcctctcacccaaagtttacaacgttaggaaagctctcagaggttaccacgagcac aaggtcaaatctcgagggcttgaggaaatagcagtgcttgaagatgtggagaagccttct gaggatgcagagaagcccaaagacacagaaccctctgagaatgtggagaagactgaggac tttgagaagccctctgaggatgcagacaagcctcaggactttgagaaaccctctgaggat gtagagaagccctctgaggatgcagagaagcctcaggactttgagaagccctctgagcat gcagtgaagtctgaggacatggaggagccctctgaggatgcagagaagcctcaggactta gagaagccctctgaggatgtggaaaaacctcaggactttgagaagccctctgaggatgta gtgaaatctgaggccatggaggagccctctgaggatgtggagatgtctgagcacatggaa cacccctcagaggatgcagaggagcctgaggatcatgaagaggagaaacctcttcttgtg gaagaacaacattccacagctctggttgaagcagttgccccagctccagctgcaccagcc ccagcagatctcctgagccaaatggaagccctggcagctcagctgagctctgcagagctc ctccagtgctattcaggaagccagctcttcgagatgcaggccaagctgcttgccatgaca aactgcatcatgaggaacctgcaggcccgctggcagcagccacctcctgaaggttcttag

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