Dryobates pubescens (Downy woodpecker): 104308379
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Entry
104308379 CDS
T08526
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpub03036
]
104308379 (SBNO1)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104308379 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104308379
NCBI-ProteinID:
XP_009907868
LinkDB
All DBs
Position
Unknown
AA seq
1388 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDSPDXXLTFPFFPLQSVPLSALELGLETEATAAV
KQEPETVSTPALLNVRQPPSTTTFVLNQINQLPTLGTTIVMTKTTPVTTTRQTITVAKII
QTSTTTRPSVAAPAVRNALTTAPSKDQIQLKDLLKNNSLNELMKLKPPPNIAQPVATAAT
DLSNGAVKKEASTKEVARIWINDIKMRSFSPTMKVPAVKEEEEPEEEDEEEMGHAETYAE
YMPIKLKIGLRHPDPVVETSSLSSVTPPDVWYQTSISEETIDSGWLSALQLEAITYAAQQ
HETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRAVWFSVSNDLKYDAERDLR
DIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHW
CGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRN
MAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGVTFK
IDEVLLSQEYVKMYNKSVKLWVSARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFFKYL
CIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVFQSL
IEKHFPAPDRKKLFSLLGIDLTAQSNNNSPRDSPCKENKIKKRKGEEISREAKKARKTGG
LAGSSSDESESESDASDNEESDNESSKFLSSGDDDDFNPFRDESSEDDEDDPWLIRKEHK
KNKDKKKKKSIDPDSIQSALLASGLGSKRPSCFTSTVGTTTSSTNTSANSNTNSSFVTSQ
DAVERAQQMKKELLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDGSI
SYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVHMTL
ELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRR
ATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDFPGDFFKDVRQGLIGVGLI
NVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFSDTLNAVIQNAKKNGRYDMG
ILDLGSGDEKVRKADVKKFLTPGYSTSGHVELYTISVERGMSWDEATKIWAEQTGPDDGF
YLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLETCADLKKKYKKVPSEDALPH
WLEQYNSSADTCTHAYWRGNCKKAGLGLVCEVGLRCRTYYVLCGSVLSVWTKVEGVLASV
SGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQQQIWQQHHPQ
SITNFNNA
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccaggacaagatctgttgcttgctgctttgagcgagagtggaatcagtcca
aatgatctatttgatattgactctccagacgnnntcttgacgtttcctttctttcccctg
cagtcagtgccacttagtgcattagaactaggcttggagactgaggccacagctgctgtg
aaacaagaaccagagactgtatcaactccagccttgttaaatgttcggcaaccaccatcc
accacaaccttcgtgctgaatcaaataaatcagcttccaactttggggactacaatagtg
atgacaaaaacaacacctgttacaaccacgaggcaaaccatcactgtagcaaaaatcatt
cagaccagcacaactactcgaccctcagttgcagcaccagcagtacgcaatgccttgacc
actgcaccttcaaaggaccagattcagctaaaagatctcctaaagaataatagtcttaat
gaactcatgaaattgaagccacctcctaatattgcccaaccagtagcaacagcagcaacc
gacctaagcaatggtgcagtgaagaaggaggcttccacaaaagaggtagcaagaatatgg
ataaatgatattaaaatgagaagcttttcacctacaatgaaagtgccagcagtaaaagag
gaggaggaacctgaggaggaagatgaagaagaaatgggccatgcagaaacttatgctgag
tacatgccgataaaattaaaaattggtctacgtcatcctgacccagtagtggaaaccagc
tcattatccagtgtaactcctcctgatgtgtggtaccagacatcaatatcagaagaaaca
attgatagtggctggttgtcagctttgcaacttgaagcaatcacttatgcagcccagcaa
catgaaacattcctgcccaatggagacagagctggattcttgataggtgatggtgctggt
gtaggaaaaggaaggaccatagctggaataatctatgaaaattacttgttaggcagaaaa
agagcagtctggttcagcgtctcgaatgatctgaaatacgacgctgaaagagatctgaga
gatattggggcaaaaaacatattggtgcattcattaaacaagttcaagtatgggaagatt
tcttccaaacataatggaagtgtgaagaaaggtgtcatctttgctacctattcgtctctg
attggtgaaagtcagtctggtggcaaatacaaaaccagattaaagcagcttcttcactgg
tgtggtgaagactttgatggagttattgtatttgatgagtgtcataaagctaagaatctg
tgtcctgttggttcatcaaaaccaacaaaaacaggtctggctgtattggaacttcaaaat
aaacttcccaaagccagggttgtttatgctagtgccacaggtgcatctgagccaagaaat
atggcatacatgaaccggcttggaatatggggtgaaggaaccccatttagggaattcagc
gactttattcaggctgtcgaaagaagaggtgttggtgccatggaaatagttgctatggat
atgaagctgagaggaatgtacatagcacgacagttgagtttttcaggtgtcactttcaaa
attgatgaagttctgctatcccaggaatatgttaaaatgtacaacaaatctgtgaaactg
tgggtgagtgctagagagagatttcaacaagcagctgacctaatcgatgcagagcaacga
atgaaaaagtccatgtggggtcagttttggtcagctcatcagaggtttttcaagtacctt
tgcatagcatctaaagtaaagagagtggtgcagcttgctcgggaggaaatcaagaacgga
aaatgtgttgtcattggcctgcagtcaacaggagaagcaagaacattagaagctttggag
gaaggtggtggtgaactgaatgactttgtttctacagcaaaaggagtattccagtctctt
attgaaaagcactttccagctcctgacaggaagaagctgtttagcttgttgggaattgac
ttgactgctcaaagtaataacaattcacctagagacagcccttgcaaggagaacaaaata
aagaagcggaaaggtgaggaaatcagcagagaagccaaaaaagctcgcaaaacaggtggc
cttgcaggtagcagctctgatgagagtgaaagcgaatctgatgcttcagacaatgaagaa
agtgataatgagagctccaaatttttgagttctggagatgatgatgacttcaacccattc
agagatgaatccagtgaagatgatgaagatgatccctggttaattagaaaagagcataaa
aaaaataaagacaagaaaaagaagaaaagcatagacccagattctattcaaagtgcctta
ctagcttctggtctcggatcaaaacgacccagctgttttacttccactgttggtaccacc
acttctagtaccaacacatcagctaacagtaacacaaacagcagctttgtaacaagtcag
gatgctgttgaaagggcccaacaaatgaaaaaagagctgcttgataaactggaaaagctg
gctgaagatcttccacctaatacgctggatgagcttatagatgagctgggtggtcctgaa
aatgttgcagagatgacaggccgcaaggggagagttgtaagcaatgatgatggcagcata
tcttatgagtcaaggtctgaacttgatgtgcctgttgaaattctgaacatcacggaaaag
cagaggttcatggatggagataagaacattgccatcatctcggaggctgccagctctgga
atatcattgcaagcagaccggagagctaagaatcagagacggagagttcacatgaccctg
gagctaccatggagtgcagacagagcaatacagcagtttggaagaactcatagatccaac
caagtgactgctccagagtatgtgttcctaatttctgaattggcaggagagcagagattt
gcatctatagttgcaaaaagactggagagcttgggagccctcacccatggtgacagacgg
gccacagaaactcgagacctcagcagattcaactttgacaacaagtatggcagaaatgct
ttagagattgtgatgaaatccattgtgaatttggactctcctatggtctcacctcctcct
gattttcctggagacttcttcaaagatgttcgtcagggattgattggtgtgggcttgata
aatgtagaagacagatctggaatactgacacttgataaagattataacaacatagggaaa
tttctgaatagaattcttggtatggaagtacatcagcagaatgctttattccagtacttc
tctgacacattaaatgcagttattcaaaatgctaaaaagaatggaagatatgatatgggc
atcttagatttgggctctggggatgagaaagtaagaaaggcagacgttaagaagttctta
actcctggatattctacctctggacatgtagaactatacacaatcagtgtagagagaggc
atgtcttgggatgaagcaactaagatctgggcagaacagactggtccagatgatggattt
tatttatcattgcagataagaaataacaagaagactgctattttagtaaaggaagtgaac
cctaagaagaaactttttttagtatacagaccaaatactgggaaacaactcaaactagaa
acatgtgcagacctgaaaaagaaatataagaaggtaccctctgaagatgctctgccacac
tggttagagcagtacaattcttctgcggatacctgcacccatgcttactggagaggcaac
tgtaagaaggcaggcttgggattagtttgtgaagttggactgcgctgtcgaacttactat
gtcttgtgtggttcagtattgagtgtctggacaaaagtagaaggtgttctagcctctgtg
agtggtacaaatgtgaaaatgcaaatagttcgtctgagaacagaagatgggcagaggatt
gtgggtttgatcattcctgcaaattgtgtctcaccccttgtaaacctcctgtcaacgtca
gaccagtctcagcagcttgcagtacaacagcagcagatatggcagcagcatcacccacaa
agcatcaccaatttcaacaatgcataa
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