Dryobates pubescens (Downy woodpecker): 104308420
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Entry
104308420 CDS
T08526
Symbol
REXO1
Name
(RefSeq) LOW QUALITY PROTEIN: RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104308420 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpub03009
]
104308420 (REXO1)
Ribosome biogenesis [BR:
dpub03009
]
Eukaryotic type
Pre-60S particles
RNases
104308420 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
104308420
NCBI-ProteinID:
XP_009907921
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MNKYLQHLLTPGSSERGYDPYNPELPRPSLEEEEEEDDGALPAIPDVTPGILELELVNKA
IEAVKNEVEREQKKYEELLETTKELSASEASALLSGTAVAAAGAQGDAFSSLEYNPGSYS
FTNSSDYNPTPLAAAAGRSSKYTLETSRPKGSALEYVPKAVAQSRKYSSTVTNTKYVIDD
SKPSTDLEYDPLSNYSARLLSKATVKEAKGSKRGRPASYEESYSPSRKKLCEALDDDDEV
CARFSSSEDEADVDYKSASVSSQSKGDSESESNDGLTPQEQSSRRGGFAPLDGKEAAARG
TAAAQGAGDLPGAQKNLGKTVADKNAKAVKLSSGKREQESENKSRESKDKTKKKKSEGGK
APGPAEAGKKERSKTAEREKGLRKEEKTKGKNEEKSCKEKSVKVKAEGSGKKPDKHKAEK
GEGLKKDKAKASSSGSGKGKGESGSKGSGTEKLGSGKKDSKLRTAEVKNGKESSGRKSKE
KESKAPAGERQKGKGRAADKGDPKKGRKQRSLSHVDLFGDESGDDDDRGRPLPATLLEVS
SDSDGDDSGSDSESDSGGAKKVKRSKLAESSSSSSSSSSSSSSSTSDDIDYSILEKDLDF
ESDPMEECLRIFNESTDVKTEDKGRLGKQLSKEEGTEEKPEDNLTTLFPGQKRRISHLVK
QGNAEVPSKPVIRPYRPPTAQEVCYQRIQLAQQQAAQLAVAVQKASLSLPGEKKRIAHVP
NAAFSAAARQSLANSKTAAAGKSLPPSHDSEAPSLPLKACTLAGMASKTTSTIVPKRVAH
VPSLQSTSLQRPVIPTEFGAKVPTNIRQRYLNLFIDECLKFCSTSQEAFDKALAEEKVAY
ERSTSRNIYLNVAVNTLKKLRSLVPNSPTSTTKTSNKKVVSHEAVLGGKLAADTXXXXXX
XXXAEEQTGAALYRRLKGYLMSEEQLKENGYPMPHPEKPGRAVLFTAEEKKTTDSSCRIC
CRCGTEYMVTASGSCLGMPGGWETHYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTF
EKLPTTDGYPGIYALDCEMCYTKQGLELTRVTVINSDLKVVYDTFVKPDTKVVDYNTRFS
GVTEEDLENTSITLRDVQAXLLNMFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHR
LGLPYKRALRTLMADYLKRIIQDSVGGHDSSEDARACMELMVWKIKEDAKVKR
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtacctgcaacatttattgaccccggggagctcagagcgaggctacgacccc
tacaaccctgagctcccgaggccctcgctggaggaggaggaggaggaggatgatggtgcc
ctgcctgccatccctgacgtgacccctggcatcctggagctggagctggtcaacaaagcc
attgaggctgtcaaaaatgaagtggagagagagcagaagaagtatgaggagctgctggaa
accaccaaggagctgagcgcttccgaggcctccgcgctcctctccggcacggccgtggca
gcggccggcgcgcagggcgatgccttcagctccctggagtacaacccaggcagctacagc
ttcaccaacagctcagactacaaccccactcctcttgctgctgctgctggccgctccagc
aagtacaccctggagacctcccgccccaaaggcagcgccctggagtacgtccccaaggcc
gtggcgcagagtaggaagtacagcagcaccgtcaccaacaccaagtacgtgattgacgac
tccaagccttccacagacctggagtacgacccgctctcgaactactcggccaggctcctg
agcaaggccacggtgaaggaggccaagggctccaagaggggcaggccggcgagttacgag
gagtcctactcgccgtcgcggaagaagctctgcgaagcgctcgatgacgacgacgaggtg
tgtgccaggttctcctcctctgaagatgaagctgatgtggactacaagtcagcttctgtt
agctcccagtccaaaggggattctgaaagcgagtccaacgatggcctgaccccccaggag
cagagctccagacggggaggcttcgctcccctggacggcaaagaagcggcggcgcggggc
acggcggcggcgcagggcgccggagacctcccaggggcgcagaagaacctgggcaaaact
gtggcagacaagaatgccaaagcagtgaagctgtcctctggtaagagggagcaggagagt
gaaaacaaaagcagagagtcgaaggacaaaacgaagaagaagaagtcggagggtggcaaa
gcgcctggcccggcagaggctgggaagaaggagagaagcaaaactgcagagagggagaaa
gggctgaggaaagaggaaaagacaaagggtaagaacgaagagaagagctgcaaagagaaa
agtgtcaaagtgaaagctgaagggagcggcaagaaacctgacaaacacaaggcagaaaag
ggagaaggcctcaagaaagacaaagccaaggcctccagcagcggttcggggaagggcaag
ggcgagagcggcagcaaaggctccggcacggagaagctggggagcggcaagaaggactcc
aagctgagaacagctgaggtgaagaacgggaaggagagctctgggcgtaagagcaaagag
aaagagagcaaggctccagcaggggagcggcagaaggggaagggcagggctgcggacaag
ggagaccccaagaaggggcggaagcagaggagcctgagccacgtcgacctgtttggagat
gagagtggagatgatgatgacagaggaaggcctctgccagccaccttgcttgaggtcagc
tcagactcggatggggatgactctgggtcagactcagagagtgacagtggaggggcaaag
aaagtgaagcgctccaagctggccgagtcctcctcttcctcctcctcttcttcctcttcc
tcctcctcctccacgtccgatgacatcgattattccatcctggagaaggacctggacttc
gagtcagaccccatggaggagtgcctcaggattttcaatgagtctacagatgtgaaaact
gaggacaagggcaggctgggcaaacagctgtccaaggaggagggcactgaagaaaagcca
gaagataacttgaccaccttgttccctggccagaagaggaggatctcccatcttgtcaaa
caaggcaatgcagaggtgcccagcaagcctgtgatccggccctaccggccccccaccgcc
caggaggtttgctaccagaggatccagctggcccagcagcaggcggcacagctggctgtg
gccgtccagaaggcctctctctctttgccaggagaaaagaagaggattgcccacgtgcca
aatgcagccttctctgcagcagccagacaaagcctggcaaacagcaagaccgctgctgct
ggcaagagccttccaccttcccatgactctgaggccccctcccttcctctgaaggcttgc
accttagctgggatggcttcaaagaccaccagcaccatcgtgccaaaaagggtggcacac
gtcccctccttgcagagcaccagcttacagaggcctgttattcccacagaatttggtgct
aaagtccccacaaacatccgtcagagatatctcaacctcttcatcgatgagtgcctaaag
ttctgctccacctctcaggaagcctttgacaaggccctggcagaggagaaggtggcctac
gagcgcagcaccagtcgcaacatctacctgaacgtggcggtgaacaccctgaagaagctc
cgaagcctcgtgcccaattcccctaccagtacaaccaagacaagtaacaagaaggtggtg
tcccacgaagctgtgctgggagggaagcttgcagctgacaccnnnnnnnnnnnnnnnnnn
nnnnnnnnngcagaggagcagacaggagctgccctgtaccgccggctgaagggctacctg
atgagcgaggagcagctgaaggagaacggctaccccatgccgcaccctgagaagcctggc
agggctgtgctcttcactgcagaggagaagaagaccactgactcctcctgcaggatctgc
tgtcgctgtggcacggagtacatggtgacagcctcggggagctgcctggggatgccagga
ggatgggaaacccattacagctgctgctcaggagctgtggggtcaccaggctgccaggtt
gctaaacaacacgtccacgacgggcggaaggagagcctggatggctttgtcaagaccttt
gagaagctgcctacaactgatggctaccctggcatctatgccttagactgtgaaatgtgc
tacaccaagcaaggcctggagctgacaagagtcactgtgatcaactctgacctgaaggtg
gtctatgacacctttgtcaaaccagacaccaaggtggtggactacaacaccagattctca
ggtgtgacagaagaggacctggagaacacaagcatcactctgagggacgtccaggctngt
ctgctgaacatgttcagtgcagacaccatcctgatagggcacagcttggagagtgactta
tttgcactaaagctgatccatggcaccgtggtggacactgccatcgtcttcccgcaccgc
ctggggctgccctacaagcgagccctgcgcacgctgatggccgactacctcaagcgcatc
atccaggacagcgttggagggcacgactcgagcgaggacgccagggcctgcatggagctg
atggtctggaagatcaaagaagatgccaaggtgaaacgatga
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