Dryobates pubescens (Downy woodpecker): 104308457
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Entry
104308457 CDS
T08526
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03013
Nucleocytoplasmic transport
dpub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104308457 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
104308457 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpub03019
]
104308457 (THOC5)
03041 Spliceosome [BR:
dpub03041
]
104308457 (THOC5)
Messenger RNA biogenesis [BR:
dpub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104308457 (THOC5)
Spliceosome [BR:
dpub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104308457 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
104308457
NCBI-ProteinID:
XP_009907964
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGGPQEGKRGKADAEQDIRYYSEECEVDLRDPIKDYELYRETCQ
ELQRLMAEIQELKSRGIKDNAAEIDERRIQSCVHFMTLKKLNFFLKKGRDQTHEAKQKVD
AYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYKEAPPEISRPAITLAEPH
QQTLARLDWELEQRKRLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQ
EYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKALYKPP
EDSQDDESDSDVEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLAVTIDLKCKDENVLHLTF
YYLMNLNVMTVKAKVTTAMELTAAISAGDLLSPDSILNCLYPGDHGRKTPNPANQFQFDK
VGILTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHTVTADNSLSASHMELTVKLLRSRLQ
SRLALHKQFASLEHGVVPVSSECQHLFPTKIVSRLVKWAAVPYEDYAELPYTKDVIEAGL
AEDTHLYYMALIERGTAKLQAAVVVNPGYSTLPPVFSLCLNWKGERTSSNDDNIRAMESE
VNVDYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDPSVEGPKEFPQEKMCLRLVRG
PMRLKPFKFNYPQGFFSHR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggactccagcaagaagaggaagcccaaagtgatccggacggatgggggcccc
caggagggcaagcgaggcaaggctgatgctgaacaggacatcaggtactacagtgaggag
tgtgaggtggatctccgtgaccccatcaaagactacgaactctacagggagacctgccag
gagctgcagaggctgatggcagagatccaggagctgaagagcagaggcatcaaggacaat
gctgccgagatcgacgagcggcgcatccagagctgcgtccacttcatgaccctgaagaag
ctgaactttttcctcaagaagggcagagaccaaacccacgaggcaaagcagaaggtggat
gcctaccacctacagctccaaaacttgctctatgaggtgatgcacctgcagaaagagatc
accaagtgcctggagttcaagtccaagcacgaggagatcgagctggtgagcctggaggag
ttctacaaggaggccccccccgagatcagccgccctgccatcaccctggccgagccccac
cagcagaccctggcccgcctggactgggagctggagcagcgcaagcggctggcagagaag
tacaaggagtgcctgaccagcaaggagaagatcctgaaggagattgaggtgaagaaggag
tacctgagcagcctccagcctcgcctcaacagcatcatgcaggcctctctgcctgtccag
gagtatctcttcatgccgttcgaccaggcacacaagcagtacgagacggctcggcacctc
ccgccgcctctctacgtcctcttcgtccaagccagcgcctacggccaggcctgcgacaag
aagctcgtggtggccattgaaggcagtgtagaggaagccaaagccctgtacaagccacct
gaggactcccaggatgatgaaagcgattcggacgtggaggaggagcagaccacgaagcgg
cgccggcccacgctgggcgtgcagctggacgacaagcgcaaggagatgctgaagcggcac
cccctggccgtcaccatcgacctgaagtgcaaggatgagaatgtgctgcacctgaccttc
tactacctgatgaacctcaatgtcatgacagtgaaagccaaggtgaccactgccatggag
ctgacagcagccatcagtgctggtgacctgctctccccagactccatcctcaactgcctc
tatccaggagaccatgggaggaaaacccccaacccagccaaccagttccagtttgataaa
gtgggcatcctgaccttgagtgactacgtgacagagctgggacacccctatgtgtgggtg
cagaagctgggcggcctgcacttccccaaggatcagcctcagcacacagtcactgcagac
aactctctgagtgccagccacatggagctgacggtgaagctgctgcgctcgaggctgcag
tcccgcctggctctgcacaagcagtttgcatcccttgagcatggtgttgtgccagtctcc
agcgagtgccagcatctcttccctaccaagatcgtctcgcgcctggtgaagtgggcagcc
gttccctacgaggattacgcagagctgccctacaccaaggatgtgatagaggctggcttg
gctgaggacactcacctctactacatggccttgatagaaagaggaacagccaagctgcag
gctgccgtggtggtgaaccctgggtactccacgctgcctccggtcttcagcctctgcctc
aactggaagggagaacggaccagcagcaacgacgacaacattcgggccatggagagcgag
gtcaacgtggactacaaggagctgtggggtcccaagccaggctaccagctgctcaccaac
cagctccagcgtctctgtatggtgctggatgtctacctggagacagagccccatgacccc
agcgtggaggggcccaaggagtttccccaggagaagatgtgtctgcgcctggtcaggggt
cccatgcgccttaagcccttcaagttcaactacccccagggcttcttcagccatcgctga
DBGET
integrated database retrieval system
