Dryobates pubescens (Downy woodpecker): 104308748
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Entry
104308748 CDS
T08526
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104308748 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpub03021
]
104308748 (TAF4)
03036 Chromosome and associated proteins [BR:
dpub03036
]
104308748 (TAF4)
Transcription machinery [BR:
dpub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104308748 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
104308748 (TAF4)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104308748 (TAF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
104308748
NCBI-ProteinID:
XP_009908269
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MGLSAPEITKAGAGGVQGGVINHNTRSQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLS
QGKSVVISTMATALSTRNGKIGTTTVQTLNGSNVVMNSHHTGSAAFSGTPVTANPASAPA
VAPLVNNGPGSVGKGSTVNAVLPSASNTVIQTSFLNTAVSSASSSSPTVISSQPPPSIGT
GAPTVTLVRPPIHTAGPTVAAAGAATQNGSNTVINSTISVGSFPAVATATVGSGVSLQTS
LVNSQSGSTVPAAPTAQVIKSESPKTIVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGL
SNVAPNPGGIPPAAPGTPTGMAKGTANTVAQTLPRTPTATTSGIRATLTPTVLAPRLPQP
PQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQSQPQNTMTPRPATPTS
APPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQ
TTTLGTATAVQTGTPQRTVQGTTATSTIATETMENVKKCKNFLSTLIKLASSGKQSSETA
ANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQ
SQQQQPTTQATIATIPSAAVILSSAVQRTAGKAAAAVTSTLQQPVISLTQPTQVGVSKQG
QSTPLVIQQPQKAGALIRPPQVTLTQTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPA
VLPGNKAIATISTQVAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNS
ELVGTLTRSCKDETFLFPAPLQRRILEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKL
SETAQQKNISYKDDERYEQASDVRAQLKFFEQLDHIEKQRKDEQEREILMRAAKSRSRQE
DPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSSGSGSGTEGSGSSAA
VPGSSGVGTTSQFKRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgggactgagtgccccagagatcacaaaagcaggggcaggaggagtgcaagggggtgtt
attaatcataacaccaggtcccagacatccgctctggatggagccaccacaacgagcacc
agcaccaccactgcagcagcaggaggttctgaagtcactgctgctccagggaccctcagt
cagggcaaatcggtggttatcagcaccatggcaactgcgttgtccaccaggaatggcaag
attgggaccacaacagtgcaaactttgaatgggagtaatgtggtgatgaactctcaccat
acaggaagtgctgctttctctgggactcctgtgactgctaaccctgcttctgcacctgct
gtggcccctctcgttaacaatggacctggatctgtggggaaaggaagtactgttaatgct
gttttgccatcagcttccaacactgtcatccagacttctttccttaatactgctgtgtcc
tctgcatcttcctcttcacccacagttatctcctcgcagccaccaccaagcattggaact
ggggctcctacggtaacgcttgtgaggccaccaattcacacagcaggacccacagtagct
gcagctggtgcagccactcaaaatgggagcaatactgtgataaattcaaccatcagtgtg
gggagttttcctgctgttgctacagccactgtgggatctggagtttccctccagacatca
cttgtgaacagccagtctggctccactgtgccagcagctcccactgcacaggtcatcaaa
tctgagtctcctaaaactatagtccaggcagtatcccagcagcagacgctggctactggt
ggccagcccagtactacagggggtaatatgattattgggcaaactatgcaagctgggctc
tctaatgttgctcccaatcctggtgggatacctcctgcagctccgggcacccctacagga
atggctaaaggcactgccaatacagtggcacaaactctgccacggactccaacagcaact
acaagtggaatcagagcaactttgactcctacagttttagcacctcgtttgcctcagcca
cctcagaacccaactaacattcagaattttcagttaccaccaggcatggtccttgtacgc
agtgagaatgggcagttgctgatgatccctcagcaagccttggcgcagatgcaggcacag
gcacatgcccagtctcagcctcaaaatacaatgactcctcgtcctgctacacctaccagt
gctcctccagtgcagatatcgacagtgcaggccccaggaacacctattattgcacgacag
gtgacaccaactactattatcaagcaagtgtctcaggctcaaacaacagtgcaacccaca
acaacactacagcgtcctcctgttgtgcaacctcagattgttctgggtggtactgcacaa
acaaccacgttggggacagcaacagctgtacaaactggaactcctcagaggacagtgcaa
ggaacaacagcaacctccactattgccacagaaactatggaaaatgtgaagaaatgcaaa
aactttctgtccacgttaataaaactggcatcatctggaaaacagtcttcagaaactgca
gctaatgtgaaagaattggtacagaacttgctggatggaaaaattgaagcagaagacttt
accagcagactgtacagagaacttaattcttcacctcaaccttaccttgtgcctttcctg
aagaggagtttacctgccttgagacaattaacaccagactctgcagctttcattcaacaa
agtcaacagcagcagccaacaacgcaagcaacgatagcaactattccatctgcagcagtg
attctgagctcggcagttcagcgcactgcagggaaggcagctgcagctgtaacgagtacc
ctccaacaacctgtaatcagcctaactcagcctacacaagttggtgttagcaaacaaggg
cagtctacaccactggttatccaacagcctcaaaaagcaggggcattgataaggcctcca
caggtaacattgacacagacaccaatggtggcgttacggcaaccgcatagtcgtattatg
ctcactactcctcagattcaactgaatcaacttcagacagtaccggtggtaaaaccagca
gtattacctggaaacaaagctattgccactatttcgacacaagtagcggcggctcagaag
aataaactgaaagaacctgggggaggctcttttagggatgatgatgacattaatgatgtt
gcatcaatggctggagtcaacctgtcagaggaaagcgctcggatattggcaacaaactcc
gaactagtgggtactttaacaaggtcctgtaaagatgaaaccttccttttcccagcacct
ttacaaagaaggatattagaaataggtaaaaaacatggaataacagaaatccatcctgat
gtagttagctatgtatcacatgctacacaacaaagactacaaaacctcgtggaaaaatta
tcagaaactgctcaacaaaagaatatttcttacaaggatgatgaaagatacgaacaagcg
agtgacgttcgggcacagctcaagttctttgaacaacttgatcacatagaaaagcagcgt
aaagatgaacaagaaagggaaattttaatgcgtgcggcaaagtctcgatctcgacaagaa
gatccagagcagcttaggttgaaacagaaggccaaggagatgcagcaacaagagctagca
cagatgagacagagggatgccaacttgactgcattagctgcgatcggtcccagaaagaaa
aggaaactagattcatcgggatctggatcagggacagagggatctggctcgagcgcagca
gtcccgggcagctctggagtgggaaccaccagtcagtttaagcgacaaaggataacgcgg
gtgaacctcagggacctcatattttgtttagaaaatgagcgagagacaagccattcacta
ttgctatacaaagcattccttaagtaa
DBGET
integrated database retrieval system
