Dryobates pubescens (Downy woodpecker): 104308827
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Entry
104308827 CDS
T08526
Symbol
DCTN1
Name
(RefSeq) LOW QUALITY PROTEIN: dynactin subunit 1
KO
K04648
dynactin 1
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04814
Motor proteins
dpub05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104308827 (DCTN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104308827 (DCTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104308827 (DCTN1)
03036 Chromosome and associated proteins [BR:
dpub03036
]
104308827 (DCTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dpub04812
]
104308827 (DCTN1)
Membrane trafficking [BR:
dpub04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104308827 (DCTN1)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
104308827 (DCTN1)
Cytoskeleton proteins [BR:
dpub04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
104308827 (DCTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynactin
Nop
CAP_GLY
NOP5NT
Motif
Other DBs
NCBI-GeneID:
104308827
NCBI-ProteinID:
XP_009908364
LinkDB
All DBs
Position
Unknown
AA seq
1763 aa
AA seq
DB search
MAQSKRHTYSRASGTGPRMSAEAGSKPLKVGSRVEVIGKGHRGTVAYVGATLFATGKWVG
VILDEAKGKNDGTVQGKKYFTCEENHGIFVRQSQIQVFEDGADTTSPETPESAALKVPKR
DSLDAAKASKLRGAKPKKAPATRKTTARRPKPTRTPTSAASSGTAGPSGSASASGGEMSS
SEPSTPAQTPLVAPVIPSPSLTSPVAPPVPSPTKEEENLRSQVRDLEEKLETLKIKRNED
KAKLKELEKYKIQLEQVQEWKSKMQEQQADLQKRLKEAKKEAKDALEAKERYMEEMADTA
DAIEMATLDKEMAEERAESLQQEVDSLKEKVEYLTMDLEILKHEIEEKGSDGAASSYQVK
QLEEQNARLKEALVRMRDLSASEKQEHVKLQKQMEKKNTELESLRQQREKLQEEVKQAEK
TVDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVGDLVRXTALGRELRGRREQL
DMATARVRQAEKRVEAAQETVADYQQTIKKYRELTAHLQDVNRELMSQQKASAEKQQQPP
PEMFDFKIKFAETKAHAKAIEMELRQMEVQQANRHLALLTSFMPDSFLRHGGDHDCVLVL
LLIPRLICKAELISKQAQEKFDLNENCAERSGLRGAAGEQLSFAAGLVYSLSLLQATLHK
YEQALNKCSVEVYKKVGMLYPEMSVHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQH
LYSIHLADQAEDCTLQLADHIKFTQSALDCMGVEVCRLRSFLQVGQAGAGSERGGGWGCA
AGSFPCAWEATWEAPPCLPLPTALLLSHRQVSDTLLDCRKHLTWVVAVLQEVAAAGAQMI
APLAENEGLLAVKLEDLAFKASEQIYGAQGINPYECLRQSCSILIATMNKMATAMQEGEY
DADRPQTKPTPPAELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANV
RLSLLEKKLDSASKDADDRVEKIQTKLDETQTLLKKKEKEFEETMDALQADIDQLESEKV
ELKQRLSNQSKRTIEGLRGSPASGVASIVSGIAGEEQQRGVGAGQLNGGGSGPVQVKDSP
LLLQQIDALQLSIKHLKNENNRLKGAQMKMELASLAPLQVPKVSLPRNRQGEVLATQTLY
RKSSQLLETLYQMSANAKVLDMKQTKSAASPLSPAARSSSARLLEQTARLCALKNAIDTL
RDDTMRETVQQQMGASVPTNFGVFPSPSFLKAKREQEEGLSCYGRITFPCAPGQGQAHRL
LLTPDLLHGLHRGSLHPPTADRLPPPVPVLLHVLFEHAAGYALFAVREVEEISLLLPQVE
ESVLTIGKFHSLVKLVAFSPFRSAQSALENINAISEGILHEDLRLLLETSMPAKKKKALL
GVADPKIGAAILEELGYQCQTGGVVAEIMRGIRLHFHALVKGLTAQSASKAQLGLGHSYS
RAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELIKIAPENYTYCQL
AKFIGNRKELSEESLEGLEEIVMDSAKAQAILEASRSSMGMDISPLDLINIESFSSRVIS
LSEYRKSLQEYLRSKMSQVAPSLSALIGEVVGARLISHAGSLTNLAKYPASTVQILGAEK
ALFRALKTRGNTPKYGLIFHSTFIGRASEVVAEVKRKLEKKEKKKKKREKRRLEALAAAA
EEVENSVVETEENDTEPKKKKKKKKQELEAASEPEQNGLEEEPVPKKKRKLTVEAAEEEE
EEKEEKKKKKKKKKEKARDSEED
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagcaagagacacacgtacagccgggcgtccggcaccggccccaggatgagc
gcggaagccggcagcaagcccctcaaggtgggctccagggtggaggtcatcgggaagggg
caccgcggcaccgtggcttacgtgggtgccaccctgtttgccaccggcaagtgggtcggc
gtcatcctggatgaagccaagggcaagaacgacggcaccgtgcagggcaagaagtacttc
acctgcgaggagaaccacggcatcttcgtgcgccagtcccagatccaagtctttgaagat
ggagctgatacaacatccccagaaacaccagaatcagctgccttgaaagtccccaaacga
gattccctggatgctgccaaagccagcaagctgcgtggagccaaacccaaaaaggccccg
gcgacacggaagaccacggcccggcgccccaagcccacccggacccccacctcggcggcg
tcgagcggcacggccgggccctcgggctcggcctccgcctcgggcggggagatgagcagc
agcgagcccagcacgcctgcccagacaccactggtggccccagtgatccccagcccctcc
ctcacctcaccagtggcacctccagttccctcacccacaaaggaggaggagaatctccgc
tctcaagtcagggacctggaggagaagctggaaactctgaagataaagagaaatgaagac
aaagcaaagcttaaagagctggagaagtacaagatccagctggagcaggtgcaggaatgg
aagagcaaaatgcaggagcagcaggctgatctccagaagcgtttgaaggaggccaagaag
gaagccaaagatgccctggaggccaaggagcgctacatggaggagatggcagacacggct
gatgccatcgagatggcaaccctggacaaggagatggcagaggagagagcagagtccctg
cagcaggaggtggactccctgaaagagaaggtggaatacctcaccatggacctggagatc
ctgaagcatgagattgaagagaaaggctcagatggagcagcctccagttaccaggtcaaa
cagctggaagagcagaatgcaagactcaaggaagcccttgtgaggatgagagacttgtct
gcctcagagaagcaggagcatgtgaagctccaaaagcaaatggagaagaagaacaccgag
ctggagtccctgagacagcagagggagaagctgcaggaggaggtgaagcaggcagagaaa
acggttgatgagctgaaggagcaggtggatgctgctttgggtgctgaagagatggtggag
actctgacagagagaaacttggacctggaggagaaggtccgggagctgcgcgagaccgtt
ggggacctggtaagataaactgccctggggagggagctgcgggggcggcgggagcagctg
gacatggccaccgccagggtgcggcaggccgagaagcgcgtggaggcggcgcaggagacc
gtggccgactaccagcagaccatcaagaagtacagagagctcacagcacacctgcaggac
gtgaaccgagagctcatgagtcagcagaaagcctctgctgagaagcagcagcagcctccc
cccgagatgtttgacttcaagattaaatttgcagagacaaaagcccatgctaaggccatc
gagatggagctgcggcagatggaggtgcagcaggccaaccgccacctcgcgctcctcacc
tccttcatgcccgacagcttcctgcgccacggaggggaccacgactgcgtgctggtgctg
ctgctcatccctcgcctcatctgcaaggctgagctgatcagcaaacaggctcaggagaag
tttgatctgaacgagaactgcgccgagcgcagcgggctgcggggagcggcgggcgagcag
ctgagcttcgctgctggcctggtttattccctcagcctgctgcaggccaccctgcacaaa
tatgaacaggccctcaacaagtgcagtgtggaggtgtacaagaaggtggggatgctgtac
cccgagatgagcgtgcacgagcgctccctcgacttcctgatcgagctgctgcacaaggac
cagctggatgagacagtcaacgtggagcccctcaccaaagccatcaagtactaccagcat
ctgtacagcatccacctggctgaccaggctgaagactgcaccttgcagctggctgaccac
atcaagttcacccagagtgccttggactgcatgggggtggaggtgtgccggctgcgatcc
ttcctgcaggtaggacaggctggggctggctctgagcggggggggggctggggctgtgca
gccgggagcttcccctgtgcctgggaagcgacctgggaagcccctccgtgcctgcctttg
ccaaccgccctgctcctgtcccaccgccaggtgtcagacacgctcctggactgccgcaag
catctgacctgggtggtggccgtgctgcaggaggtggctgctgctggggcacagatgatt
gctcctctggctgagaacgaggggctgctggctgtgaagctggaggatctggccttcaaa
gccagcgagcagatctacggtgcccagggcatcaacccctacgagtgtctgcgccagtcc
tgcagcatcctcatcgccaccatgaacaagatggccacagccatgcaggagggagagtat
gatgcagacaggccacagaccaagcccaccccacctgcggagctgcgggcagcggccctg
cgggcagagatcaccgatgctgaggggctggggcttaagctggaggacagggagacagtc
atcaaagagctgaagaagtccctcaagatcaagggtgaggagctcagtgaagcaaatgtg
aggctcagcctcctggagaagaagctggacagtgcctccaaggatgcagatgatcgtgtg
gagaagatacagaccaagctggatgagacccagacgctgctcaaaaagaaagagaaggag
tttgaggagaccatggacgcccttcaggcagatattgaccagctggagtcggagaaggtg
gagctgaagcagcggctgagcaaccagtccaagaggaccatcgagggcctgcgcggctcc
cctgcctccggcgtggcctccatcgtctccggcatcgccggcgaggaacagcagagaggt
gtgggagccgggcagctgaacggaggtggctcaggacctgtccaggtgaaggactccccc
ctgctgctgcagcagatcgatgccctgcagctctccatcaagcacctcaagaacgagaac
aaccgcctgaagggagcccagatgaagatggaactggccagcctggcacctctgcaggta
cccaaggtctccctccccaggaacaggcagggagaggtcttggccacacaaacgctgtac
cgcaagagcagccagctcctggagaccctctaccagatgagtgccaatgccaaggttctg
gacatgaagcaaaccaagtcagctgcctctcccctgtctcctgcagctcggagctcctcg
gcgcggctgctggagcagacagctcggctctgcgccctcaaaaacgccatcgacaccctg
agggatgacacaatgagggagacagttcagcagcagatgggtgccagcgtccctaccaac
tttggtgtcttcccctcgccctcctttctcaaggctaagcgggagcaggaggagggactg
tcgtgctacggccgaatcaccttcccctgtgcccccggccaaggccaggcgcaccgcctg
ctgctcacccccgacctgctccacgggctccaccgagggtcgctgcacccccccactgct
gacagacttccccctccggtgccggtgctgctgcacgtgctgttcgagcatgccgccggg
tacgcgctgttcgccgtgcgagaggtggaggagatcagcctgctgctgcctcaggtggag
gagagcgtcctgaccatcggcaagttccacagcctggtgaagctggtggccttctctccc
ttcagatcggcccagagcgccctggagaacatcaatgcaatctccgaggggatcctccac
gaggacctgcggctgctattggagacctcgatgccagctaagaagaagaaggcgctgctg
ggggtggctgaccccaagatcggagctgccatcctggaggagctgggctaccagtgccag
actggaggggttgtggccgagatcatgcgggggatccgcctgcacttccacgcgctggtg
aagggtctgaccgcccagtcggcctccaaggcccagctgggcctcggccacagctactcg
cgggccaaggtgaagttcaacgtcaaccgggtggacaacatgatcatccagtccatcagc
ctgctggaccagctggacaaggacatcaacaccttctccatgcgcgtgcgggagtggtat
gggtaccacttccccgagctgatcaagatcgcccccgagaactacacctactgccagctg
gccaagttcatcggcaaccgcaaggagctgagcgaggagagcctggaggggctggaggag
atcgtcatggacagtgccaaggctcaggccatcctggaggcctcccgctcctccatgggg
atggacatctccccgctcgacctcatcaacattgagagcttctccagccgcgtcatctcc
ctctccgagtaccgcaagagcctgcaggagtatctgcgctccaagatgagccaggtggct
cccagcctctcggcgctcatcggcgaggtggtgggtgcccgcctcatctcccatgccggc
agcctgacgaacctggccaagtacccagcctcgacggtgcagatcctgggggctgagaag
gcccttttcagggccctgaagactcgagggaacacccccaagtacgggctgatcttccac
tccaccttcatcgggcgagccagcgaggtggtggctgaggtcaagaggaagctggagaag
aaagagaagaagaagaagaagcgggagaagaggcggctggaggctctggccgccgccgca
gaggaggtggagaactcggtggtggagacagaggagaacgacacagagcccaagaagaaa
aagaagaagaagaagcaggagctggaggctgcctcagagccagagcagaacgggttggag
gaggagcctgtgcccaagaagaaaaggaaactaacagtggaggctgctgaggaggaggag
gaggagaaagaggagaagaagaagaaaaagaagaagaagaaggagaaggccagggactca
gaggaggactag
DBGET
integrated database retrieval system
