KEGG   Dryobates pubescens (Downy woodpecker): 104308841
Entry
104308841         CDS       T08526                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub03420  Nucleotide excision repair
dpub04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104308841 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104308841 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dpub04121]
    104308841 (ERCC8)
   03400 DNA repair and recombination proteins [BR:dpub03400]
    104308841 (ERCC8)
Ubiquitin system [BR:dpub04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104308841 (ERCC8)
DNA repair and recombination proteins [BR:dpub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104308841 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WDR55 WD_LRWD1 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_RIG_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_HPS5 WD40_RFWD3
Other DBs
NCBI-GeneID: 104308841
NCBI-ProteinID: XP_009908375
LinkDB
Position
Unknown
AA seq 242 aa
MGYKYFTIGTRSPKVQLCDLKSGSCSHILQGHRQEVLAVSWSPRHEYILATASADSRVKL
WDVRRASGCLSTLDQHNGEKSKASSEAANTAHNGRVNGLCYTNDGLHLLTIGTDDRMRLW
NSSTGENTLVNYGKVCNESRKGVKFTTSCGCNPEFAFVPYGSTIAVYTVFTGELITMLRG
HYSTVNCCVFQPNFQELYSGSKDCNILAWIPALREPLPDDVSEKQHLNPAYEDAWSSSDD
EG
NT seq 729 nt   +upstreamnt  +downstreamnt
atgggatacaaatactttacaattggtaccagaagccccaaagtacagctctgtgacttg
aaatctggatcctgttctcacattctgcagggtcacagacaagaagtactggctgtgtct
tggtccccacgtcatgaatatattttggcaacagcaagtgctgacagtagagtaaaatta
tgggatgtgaggagagcatctggatgtctgagcacacttgatcagcacaatggagagaag
tccaaagcatcttctgaggcagcaaacactgctcacaatgggagagtcaacggtttatgc
tatacaaatgacggacttcatctgctgaccattggtacagatgaccggatgcgactctgg
aacagctccactggagaaaacacattagtgaattatgggaaggtctgtaatgaaagcaga
aaaggggtcaaattcaccacctcctgtggctgcaatccagagtttgcctttgtaccatat
ggcagtaccattgctgtctatacagttttcacaggagagctgataactatgcttagaggc
cattacagtactgtcaactgctgtgtgtttcagcctaatttccaggaactttatagtggt
agcaaagattgcaatattcttgcatggataccagctcttcgagaaccacttcctgatgac
gtttctgaaaagcagcatctgaacccagcatatgaagacgcgtggagcagcagcgatgat
gaaggctga

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