KEGG   Dryobates pubescens (Downy woodpecker): 104308854
Entry
104308854         CDS       T08526                                 
Symbol
RNF4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dpub04121]
    104308854 (RNF4)
Enzymes [BR:dpub01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104308854 (RNF4)
Ubiquitin system [BR:dpub04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104308854 (RNF4)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_4 Prok-RING_4 zf-rbx1 zf-UDP zf_RING_Vps8 zf-C3HC4_4 zf-RING_16 Rtf2 zf-RING_11 zf-P11 zf-RING_10 Zn_ribbon_6 zf-RING_6 zf-RING_Vps41 DZR IBR_1 TRAF3_RING zf-ANAPC11 Zf_2nd_IFT121
Other DBs
NCBI-GeneID: 104308854
NCBI-ProteinID: XP_009908396
LinkDB
Position
Unknown
AA seq 192 aa
MSTRKRRGGAVNARQARKRNRLVASTAEMASEAEPIEVEESAGEEVVDLTCESSEPVVVD
LTHNDSVVIVEENQRPRRNLRLRSQRQSDSCVLSSDDEDETRDNDVYVTNKVSRELGPLE
DETAGSKPSGTVSCPICMDGYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNANSCPTCRK
KLNHRQYHPIYI
NT seq 579 nt   +upstreamnt  +downstreamnt
atgagcacacgaaagcgccgcgggggagcagtaaatgccaggcaagctcggaagcggaac
aggctagtggcttctactgcagaaatggcttcagaggcagagccaatagaagttgaagaa
agtgctggtgaagaagtagtagatctcacttgtgaatcttctgaacctgtagtcgttgat
ctaactcacaacgattctgttgtgattgttgaagagaatcaacggccaaggagaaacctc
agactaagaagtcagagacagtcagacagctgtgtgctgagtagtgatgatgaggatgaa
acaagagacaatgatgtgtatgtgacaaataaagtatctcgagaactgggaccactagaa
gatgaaactgcaggttccaagccgtctggtaccgtcagctgtcccatttgcatggatggc
tactcagagattgtgcaaagcggacgactgattgtgtcaaccaaatgcggccacgtcttc
tgcagccagtgcctccgtgattcccttcggaatgccaactcgtgcccaacctgcaggaag
aaactcaatcacagacaatatcatcccatctatatatga

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